Vine nitrogen status and volatile thiols and their precursors from plot to transcriptome level

Helwi, Pierre; Guillaumie, Sabine; Thibon, Cécile; Keime, Céline; Habran, Aude; Hilbert, Ghislaine; Gomes, Eric; Darriet, Philippe; Delrot, Serge; van Leeuwen, Cornelis

doi:10.1186/s12870-016-0836-y

BMC Plant Biology

Table 5 Transporter genes differentially expressed between the control and the soil N100 treatment at mid-ripening (v + 28) or ripeness (v + 35) in (a) 2013 and (b) 2014

From: Vine nitrogen status and volatile thiols and their precursors from plot to transcriptome level

A
V1_ID	Best identity description	LFC
		(v + 28)	(v + 35)
Putative transporters (Bincode 34)
VIT_00s0181g00010	Sugar transporter 1-like	ns	0.61
VIT_00s0259g00140	Oligopeptide transporter (AtOPT3)	ns	0.83
VIT_01s0011g00600	Triose-phosphate transmembrane transporter	0.73	ns
VIT_01s0011g01280	Cation transmembrane transporter	0.68	ns
VIT_01s0011g03400	Proton-dependent oligopeptide transporter (POT)	ns	−0.63
VIT_01s0011g06000	Vacuolar iron transporter 1	ns	−0.73
VIT_01s0026g00270	Potassium transmembrane transporter	0.67	ns
VIT_01s0026g01570	Nitrate transporter 1:2-like (AtNRT1:2)	0.71	0.92
VIT_02s0025g00810	Sodium hydrogen antiporter	−0.71	ns
VIT_02s0025g00990	ABC transporter family	0.82	1.12
VIT_03s0017g01290	Fatty acid transporter	−0.66	ns
VIT_03s0017g02170	Zinc transmembrane transporter	0.60	0.74
VIT_03s0038g02140	Putative amino acid permease	ns	−0.80
VIT_03s0038g03950	Mitochondrial substrate carrier family	−0.84	ns
VIT_03s0063g02250	Polyol transporter 5-like (AtPLT5)	ns	−0.83
VIT_05s0020g03140	Carbohydrate transmembrane transporter	0.64	ns
VIT_05s0049g02240	AWPM-19-like	ns	−0.70
VIT_05s0049g02310	Integral membrane transporter family	−0.91	ns
VIT_06s0009g01140	Amino acid transporter family	−0.60	ns
VIT_06s0061g00440	Heavy-metal-associated domain-containing protein	0.68	ns
VIT_06s0061g00730	Gamma tonoplast intrinsic protein (Gamma-TIP)	1.32	1.01
VIT_07s0151g00340	Sulfate transporter 3;1	ns	1.07
VIT_08s0007g02240	Cation exchanger 3	0.73	ns
VIT_08s0007g04780	Gamma tonoplast intrinsic protein (Gamma-TIP)	0.77	0.71
VIT_08s0007g06760	Putative metal tolerance protein (MTPc3)	0.66	ns
VIT_10s0003g02540	P-Glycoprotein 9	ns	−0.77
VIT_10s0003g02620	AWPM-19-like membrane family	−0.66	ns
VIT_10s0003g05480	Phosphoglyceride transfer family protein	1.00	1.49
VIT_11s0016g04160	Sulfate transporter 3;5 (SULTR3;5)	0.71	0.70
VIT_13s0019g04220	Tryptophan/tyrosine permease family	−0.63	ns
VIT_13s0019g04660	Amino acid transporter family	1.22	1.31
VIT_13s0067g02220	Amino acid transporter family	0.67	ns
VIT_14s0030g00340	Sugar transporter family	ns	0.60
VIT_14s0068g02190	Chloride channel protein	1.23	0.89
VIT_14s0108g00430	Auxin efflux transporter	ns	0.65
VIT_14s0108g00630	Amino acid transporter family	1.29	ns
VIT_15s0046g02420	Plasma membrane intrinsic protein (PIP1A)	0.68	ns
VIT_16s0050g01620	ABC transporter family protein	0.73	ns
VIT_18s0001g02120	Inorganic anion transmembrane transporter	ns	−0.73
VIT_18s0001g04910	Sulfate transmembrane transporter (SULTR1;3)	0.64	ns
VIT_18s0041g00590	Proton-dependent oligopeptide transporter (POT)	ns	0.87
VIT_19s0015g00860	Oligopeptide transporter-like (AtOPT1)	−1.12	−0.96
VIT_19s0090g01480	Sodium transporter	ns	−0.62
B
V1_ID	Best identity description	LFC
		(v + 28)	(v + 35)
Putative transporters (Bincode 34)
VIT_01s0010g02440	Chlorophyll/glutathione-S-conjugate transporter ATPase (AtMRP3-like)	1.08	ns
VIT_14s0068g02190	Chloride channel protein	0.90	ns
VIT_18s0001g02140	Manganese ion transmembrane transporter	−0.94	ns
VIT_19s0085g00740	Zinc transmembrane transporter	0.91	1.24

p value ≤ 0.05 and │LFC│ ≥ 0.6. C control, ns not significant

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