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Table 1 Number of base substitutions in 5S rDNA of Atropa belladonna

From: Evolutional dynamics of 45S and 5S ribosomal DNA in ancient allohexaploid Atropa belladonna

Clone

Length

Transversions

Transitions

Total number of base substitutions

C → T, G → A

T → C, A → G

Group I: long repeats

 Ab-5S-05

199

0

1

0

1

 Ab-5S-09

199

1

1

1

3

 Ab-5S-14

199

2

2

0

4

 Ab-5S-15

199

0

0

0

0

 Ab-5S-16

199

2

2

0

4

 Ab-5S-24

200

5

3

0

8

 Ab-5S-93

198

0

0

0

0

Total for group I

1393

10 (50.0%)

9 (45.0%)

1 (5.0%)

20 (100%)

Group II: intermediate repeats

 Ab-5S-03

112

0

0

0

0

 Ab-5S-36

144

6

9

1

16

 Ab-5S-37

112

0

1

0

1

 Ab-5S-43

112

0

0

0

0

 Ab-5S-53

112

0

0

0

0

 Ab-5S-52

112

1

2

0

3

 Ab-5S-54

112

0

0

0

0

 Ab-5S-61

112

0

1

0

1

Total for group II

928

7 (33.3%)

13 (61.9%)

1 (4.8%)

21 (100%)

Group III: short repeats

 Ab-5S-02

54

1

5

0

6

 Ab-5S-32

53

1

5

0

6

 Ab-5S-33

54

1

4

0

5

 Ab-5S-39

62

3

4

0

7

 Ab-5S-42

54

1

2

0

3

Total for group III

277

7 (25.9%)

20 (74.1%)

0

27 (100%)

  1. Note: The number of base substitutions was calculated comparing sequences of individual clones and the consensus sequence. Lengths of clones are presented without primers used for PCR