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Table 3 Differentially-expressed genes involved in the SA, JA and ET pathways during BPH infestation

From: Gene expression and plant hormone levels in two contrasting rice genotypes responding to brown planthopper infestation

Gene ID

Fold changed (under BPH infestation)

Gene annotation

R6P/R6C

R24P/R24C

T6P/T6C

T24P/T24C

SA pathway(59)

 Os02g19970

0.41

-

-

-

aminotransferase, classes I and II, domain containing protein, OsNAAT2

 Os03g13210

-

-

9.43

-

peroxidase precursor

 Os04g43800

3.08

2.44

-

-

phenylalanine ammonia-lyase, OsPAL6

 Os08g02110

3.57

3.29

5.12

-

peroxidase precursor

 Os08g34790

-

-

4.08

-

AMP-binding domain containing protein, Os4CL5

 Os11g02130

2.07

-

2.60

-

peroxidase precursor

JA pathway(42)

 Os01g06600

-

-

2.50

-

glutaryl-CoA dehydrogenase, mitochondrial precursor

 Os01g55650

-

-

2.00

-

phospholipase, patatin family, OspPLAIVα

 Os02g10120

-

-

3.25

-

lipoxygenase, OsLOX1

 Os02g17390

-

-

2.07

-

3-hydroxyacyl-CoA dehydrogenase

 Os05g07090

-

-

4.93

-

acyl-coenzyme A dehydrogenase, mitochondrial precursor

 Os06g11210

-

-

4.09

-

12-oxophytodienoate reductase

 Os08g39840

-

-

6.92

-

lipoxygenase, chloroplast precursor, OsLOX9

 Os08g39850

-

-

6.19

-

lipoxygenase, chloroplast precursor, OsLOX8

 Os11g39220

-

-

2.37

-

acyl-coenzyme A oxidase, OsACX2

 Os12g26290

-

-

2.93

-

alpha-DOX2

 Os12g37260

-

-

3.64

-

lipoxygenase 2.1, chloroplast precursor, OsLOX11

 Os03g08310

3.32

5.89

-

-

ZIM domain containing protein, OsJAZ9; OsTIFY11a

 Os03g08320

8.16

8.55

13.67

4.82

ZIM domain containing protein, OsJAZ11; OsTIFY11c

 Os03g08330

2.65

3.03

-

-

ZIM domain containing protein, OsJAZ10; OsTIFY11b

 Os09g26780

4.82

3.15

-

-

zinc-finger protein, OsJAZ8; OsTIFY10c

 Os10g25230

3.40

4.52

-

-

ZIM domain containing protein, OsJAZ13; OsTIFY11e

 Os10g25290

3.21

2.73

2.93

3.12

ZIM domain containing protein, OsJAZ12; OsTIFY11d

ET pathway(82)

 Os01g52260

-

-

2.85

2.10

serine acetyltransferase protein

 Os01g59920

-

-

0.33

-

cysteine synthase, chloroplast precursor

 Os01g74650

-

-

0.46

-

cysteine synthase, mitochondrial precursor

 Os02g14110

-

-

0.47

-

aminotransferase, classes I and II, domain containing protein

 Os02g19970

-

-

0.41

-

aminotransferase, classes I and II, domain containing protein, OsNAAT2

 Os02g53180

-

-

3.30

-

1-aminocyclopropane-1-carboxylate oxidase protein, OsACO3

 Os03g25940

0.38

-

-

-

cystathionine gamma-synthase

 Os03g55280

-

-

0.25

-

semialdehyde dehydrogenase, NAD binding domain containing protein

 Os06g36880

-

-

2.22

-

cysteine synthase

 Os07g08500

-

-

0.41

-

C-5 cytosine-specific DNA methylase, OsMET1b

 Os07g22600

-

-

0.49

-

spermidine synthase

 Os08g25390

0.47

-

0.22

-

bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor

 Os09g12290

-

-

0.41

-

bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor

 Os09g27750

-

-

2.27

-

1-aminocyclopropane-1-carboxylate oxidase 1, OsACO2; OsACO1

 Os10g01570

-

-

0.24

-

C-5 cytosine-specific DNA methylase, OsCMT3a

 Os10g37340

2.19

2.10

2.27

-

cystathionine gamma-synthase