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Table 1 Summary of RNA–seq and de novo assembly of P. armeniaca L. unigenes

From: Comparative transcriptome profiling and morphology provide insights into endocarp cleaving of apricot cultivar (Prunus armeniaca L.)

Sequence

Number

Total nucleotides

40,145,230,606

Numbers of clean reads

159,378,508

Numbers of 200–300 bp contigs

17,108,433 (99.71%)a

Mean length of contigs (bp)

39.07

N50 length of contigs (bp)

42

Numbers of ≥200 bp transcripts

152,146 (99.99%)b

Mean length of transcripts (bp)

1579.75

N50 length of transcripts (bp)

2598

Numbers of unigenes

63,170

Mean length of unigenes (bp)

868.72

N50 length of unigenes (bp)

1689

  1. aThe proportion of contigs (length 200–300 bp) to total contigs (17,158,454)
  2. bThe proportion of transcripts (length ≥ 200 bp) to total transcrips (152,146)