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Table 1 Top-25 upregulated genes in styles of LA1777 vs. LA0407

From: Transcriptomic analysis links gene expression to unilateral pollen-pistil reproductive barriers

Gene

p value

Mean expression

Fold change

Annotation

Sopen12g017530.1

1.9E-20

3.8

1451.4

[HP] Hypothetical protein; Contains DUF pfam0403, heavy metal-associated

Sopen02g037430.1

4.1E-17

4.2

163.8

Cytochrome P450; family 81, subfamily D

Sopen05g032070.1

3.8E-14

9.2

154.9

Chalcone Synthase 2; flavonoid biosynthesis

Sopen06g021780.1

5.1E-13

3.9

116.2

Cytochrome P450; family 71, subfamily B

Sopen01g011020.1

4.0E-21

75.9

108.4

Hypothetical protein

Sopen12g006330.1

8.4E-15

22.2

58.6

2-Alkenal Reductase; involved in response to oxidative stress

Sopen08g021280.1

3.4E-11

8.4

51.8

Chlorophyll a-b Binding Protein 3C

Sopen12g026980.1

5.7E-14

4.0

36.6

Glutathione S-Transferase; involved in stress response

Sopen05g003640.1

2.8E-19

4.3

35.6

NAD(P)H Dehydrogenase subunit; in chloroplast, PsbQ-like 2

Sopen09g003470.1

6.1E-06

10.3

32.1

Threonine Dehydratase; isoleucine biosynthesis, plastid

Sopen04g002110.1

4.9E-12

5.2

29.6

Programmed Cell Death 6-Interacting Protein; endosomal

Sopen05g001950.1

2.6E-17

4.3

28.7

Major facilitator superfamily; oligopeptide transport protein

Sopen07g028940.1

4.8E-11

4.5

26.7

Cytochrome P450; family 72, subfamily A

Sopen02g033850.1

1.7E-10

10.6

22.0

[HP] Hypothetical protein; 80% identity to Solanum chacoense RALF-like5

Sopen02g027710.1

6.0E-09

182.2

20.2

Acidic Endochitinase; involved in defense response

Sopen02g022730.1

2.5E-11

5.4

19.6

Dormancy-associated auxin-repressed small protein

Sopen02g021850.1

2.2E-11

3.4

18.9

Transcription factor; bHLH30-like DNA binding superfamily

Sopen12g021490.1

7.0E-18

10.2

17.4

NAD(P)-linked Oxidoreductase superfamily protein; involved in stress response

Sopen10g025030.1

3.1E-09

4.9

14.9

Dirigent-protein like 22; involved in defense response

Sopen11g004500.1

2.8E-08

3.8

14.4

Beta Glucosidase 42 (BGLU42)

Sopen12g006340.1

6.6E-11

5.2

14.4

Transferase, HXXXD-type acyl-transferase family protein

Sopen01g047950.1

1.6E-04

17.7

14.0

ABC Transporter G family member 11-like; cutin or wax export, stress response

Sopen10g001450.1

8.8E-18

3.2

13.4

Hypothetical protein, chloroplast

Sopen03g029620.1

1.0E-04

6.8

12.8

Kunitz family trypsin and protease inhibitor (similar to Miraculin)

Sopen05g030780.1

3.7E-12

18.8

12.8

Chalcone-Flavanone Isomerase family protein

  1. Gene annotation from Spenn_v2.0 was enhanced, when possible, for genes noted as hypothetical proteins (marked as [HP])