Table 5 Upregulated genes in pollen of LA1777 vs. LA0407 that show concordant expression patterns
From: Transcriptomic analysis links gene expression to unilateral pollen-pistil reproductive barriers
Gene | p value | Mean expression | Fold change | Annotation |
|---|---|---|---|---|
Sopen05g018880.1 | 1.58E-04 | 1.5 | 84.7 | Hypothetical protein |
Sopen03g040880.1 | 8.68E-06 | 0.7 | 36.0 | RNI-like, F-box, ubiquitin-protein ligase activity |
Sopen01g027170.1 | 7.75E-05 | 0.6 | 28.5 | RNI-like, F-box, Skp2-like |
Sopen02g038110.1 | 7.81E-06 | 0.6 | 24.9 | Cytochrome P450 724B1 |
Sopen02g036410.1 | 1.18E-05 | 64.8 | 16.7 | Putative Hexokinase |
Sopen12g026740.1 | 3.26E-04 | 114.7 | 11.9 | Hypothetical protein |
Sopen10g027930.1 | 4.98E-04 | 5.0 | 11.9 | RAPTOR/KOG homolog located in CUL4 RING ubiquitin ligase complex |
Sopen01g008220.1 | 1.05E-04 | 1.9 | 9.3 | Hypothetical protein |
Sopen05g029540.1 | 2.80E-04 | 0.4 | 8.8 | RNA-directed DNA polymerase |
Sopen01g028020.1 | 5.26E-05 | 3.4 | 7.3 | Hypothetical protein |
Sopen12g027920.1 | 4.39E-05 | 0.3 | 7.0 | Zinc Finger Transcription Factor SUF4, involved in histone methylation |
Sopen12g004180.1 | 3.29E-04 | 112.9 | 4.6 | Oligouridylate Binding Protein 1B |
Sopen01g005900.1 | 1.36E-04 | 111.6 | 4.5 | Hypothetical protein |
Sopen05g030530.1 | 3.09E-04 | 20.8 | 4.5 | Annexin, Ca2+-binding protein |
Sopen03g024730.1 | 4.76E-05 | 5.5 | 3.9 | DNA Helicase |
Sopen03g027800.1 | 2.34E-04 | 10.9 | 3.8 | Exostosin |
Sopen02g038520.1 | 6.46E-04 | 247.3 | 3.7 | Lysine-Histidine Transporter (LHT1) |
Sopen11g020250.1 | 4.01E-04 | 5397.5 | 3.7 | GATA Type Zinc Finger Transcription Factor |
Sopen06g022340.1 | 4.85E-04 | 6.5 | 3.5 | Disease resistance/zinc finger/chromosome condensation-like region domain containing protein |
Sopen07g015260.1 | 3.61E-04 | 108.5 | 3.2 | Vacuolar Proton ATPase Subunit VHA-a isoform 2 |
Sopen11g021110.1 | 1.90E-04 | 129.8 | 3.1 | Protein of unknown function, DUF593 |
Sopen06g009470.1 | 2.13E-04 | 0.8 | 3.1 | Hypothetical protein |