Table 1 Metrics for cranberry bean seed coat transcripts generated by Illumina sequencing

Raw reads

55,936,639 (±5.9%)

50,956,017 (±4.4%)

50,662,455 (± 5.4%)

54,666,751 (± 7.5%)

52,473,537 (±6.2%)

54,424,625 (± 6.4%)

Trimmed reads

51,875,329 (±5.0%)

47,244,783 (± 4.4%)

47,241,601 (± 4.9%)

50,916,550 (± 7.5%)

48,876,790 (± 5.9%)

50,446,588 (± 5.4%)

Total mappings

50,185,242 (± 4.8%)

45,620,314 (± 4.5%)

45,831,924 (± 4.9%)

49,381,726 (± 7.5%)

47,212,581 (± 5.9%)

48,831,478 (± 5.2%)

Single mappings

49,391,395 (± 4.8%)

45,003,334 (± 4.5%)

45,174,334 (±4.8%)

48,592,490 (±7.5%)

46,573,926 (± 5.9%)

48,173,184 (± 5.2%)

Multi mappings

793,847 (± 4.1%)

616,980 (± 6.4%)

657,590 (± 7.7%)

789,237 (± 6.4%)

638,656 (±5.7%)

658,294 (± 5.8%)

Alignment (%)

95.3 (± 0.3%)

95.3 (± 0.2%)

95.7 (± 0.1%)

95.5 (±0.2%)

95.4 (± 0.2%)

95.6 (± 0.2%)

Transcripts

42,715 (±0.7%)

41,368 (± 0.3%)

41,077 (± 0.4%)

42,921 (±0.5%)

41,400 (± 0.2%)

40,993 (± 0.2%)

Gene counts

27,915

27,727

27,661

27,897

27,683

27,626