Table 1 Cotton genome assemblies included in CottonFGD
From: CottonFGD: an integrated functional genomics database for cotton
Speciesa | Date Provider | Assembly Size (Mb) | Chromosome Numberb | Annotated Genes |
|---|---|---|---|---|
Diploid | ||||
G. raimondii (Ulbr.) | Joint Genome Institute (JGI) [1] | 761.4 | 13 (+1020) | 37,505 |
G. raimondii (D5–3) | Beijing Genome Institute (BGI) [2] | 775.2 | 13 (+4434) | 40,976 |
G. arboreum (Shixiya1) | Beijing Genome Institute (BGI) [3] | 1694.6 | 13 (+75,581) | 41,331 |
Tetraploid | ||||
G. hirsutum (Tm-1) | Nanjing Agricultural University (NAU) [7] | 2447.0 | 26 (+38,951) | 70,478 |
G. hirsutum (Tm-1) | Beijing Genome Institute (BGI) [4] | 2150.9 | 26 (+9128) | 76,943 |
G. barbadense (Xinhai-21) | Nanjing Agricultural University (NAU) [5] | 2263.5 | 26 (+2013) | 77,358 |