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Fig. 1 | BMC Plant Biology

Fig. 1

From: Transcriptomic changes reveal gene networks responding to the overexpression of a blueberry DWARF AND DELAYED FLOWERING 1 gene in transgenic blueberry plants

Fig. 1

Phylogenetic analysis of CBF/DREB1 proteins of blueberry and multiple protein sequence alignment of DDF1 and VcDDF1 orthologues. a Phylogenetic analysis of nucleotide sequences of CBF/DREB1 proteins of blueberry and A. thaliana using Neighbor Joining in MEGA 6.06. The bootstrap values were obtained from 500 replicates. The tree was drawn to scale, with branch length equal to substitutions per nucleotide. The black square shows the transgene VcDDF1 and c62996-g1-i1 is another endogenous VcDDF1. b Multiple sequence alignment of DDF1, VcDDF1 and protein sequences of VcDDF1 orthologues from six plant species using Clustal Omega (https://www.ebi.ac.uk/Tools/msa/clustalo/). The ethylene-responsive element binding factor/APETELA2 (ERF/AP2) DNA-binding domain is underlined and the [ETRH and DS(A/V)WR] signatures are indicated by *. AEQ49674.1: DREB1 (Vaccinium myrtillus). ACJ54953.1: DREB1 (Vaccinium vitis-idaea). AHL69786.1: DREB (Camellia sinensis). AJG39854.1: CBF (Actinidia chinensis). XP_015901870.1: DREB1A (Ziziphus jujube). CBI34750.3: unnamed protein product (Vitis vinifera)

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BMC Plant Biology

ISSN: 1471-2229

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