Candidate gene | Alignment PopSet number | Site on alignment | Variant | Effects (site on reference sequence translation) |
---|---|---|---|---|
AGPS2 | 694,187,965 | 145 | T/C | In exon; CTT / CTC, leucine ->Â leucine, synonymous |
UGPase | 694,186,492 | 336 | T/C | Variant in the first base of the exon, adjacent to a predicted intron acceptor site; codon change AGT / AGC, serine ->Â serine, synonymous |
Starch synthase II (rug5) | 1,206,484,033 | 307 | G/A | In exon; GGT / AGT, glycine ->Â serine (249), non-synonymous |
AGPL1 (rb) | 694,185,424 | 9 | A/C | In 5′ UTR |