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Fig. 5 | BMC Plant Biology

Fig. 5

From: Comparative RNA-seq based transcriptome profiling of waterlogging response in cucumber hypocotyls reveals novel insights into the de novo adventitious root primordia initiation

Fig. 5

Response of transcription factors to waterlogging. a Graphical representations of waterlogging-regulated transcription factors based on their assigned protein families. b The group VII ethylene response factors in cucumber genome. The full-length protein sequences were analyzed with a neighbor-joining method. Numbers above branches represent the bootstrapped value from1000 replicates. RAP2.2 (AT3G14230), RAP2.12 (AT1G53910), HRE2 (AT2G47520), RAP2.3 (AT3G16770) and HRE1 (AT1G72360) were Arabidopsis group VII ethylene response factors. Asterisks indicate a conserved motif at the N-terminus initiated with Met1-Cys2, as identified by multiple sequence alignment. ‘Z WL vs control’ represents the fold change of the gene in hypocotyls of ‘Zaoer-N’ 2 days after waterlogging treatment than unwaterlogged control; ‘P WL vs control’ represents the fold change of the gene in hypocotyls of ‘Pepino’ 2 days after waterlogging treatment than unwaterlogged control

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BMC Plant Biology

ISSN: 1471-2229

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