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Table 1 Proteins highly similar to NPR1 or Non-inducible immunity protein 1 (NIM1)

From: A post-gene silencing bioinformatics protocol for plant-defence gene validation and underlying process identification: case study of the Arabidopsis thaliana NPR1

Entry name

Gene names

Status

Protein name

Q9LY00

WRKY70 or At3g56400

✓

Probable WRKY transcription factor 70 (WRKY DNA-binding protein 70)

Q9LMM5

MPK11 or At1g01560

✓

Mitogen-activated protein kinase 11 (AtMPK11) (MAP kinase 11)

O64834

At2g23680 or F26B6.33

✓

Cold-regulated 413 plasma membrane protein 3 (AtCOR413-PM3)

Q9ZPY9

PI4KG4 or PI4KGamma4

✓

Phosphatidylinositol 4-kinase gamma 4 or At2g46500 (AtPI4Kgamma4) (PI4K gamma 4)

Q39054

CNX1 or At5g20990 or F22D1.6

✓

Molybdopterin biosynthesis protein CNX1

Q5XEZ8

PUB2 or At5g67340

✓

U-box domain-containing protein 2

Q9SJ52

YLS9 or NHL10 or At2g35980

✓

Protein YLS9 (Protein NDR1/HIN1-LIKE 10)

Q9SGI8

CML40 or At3g01830

✓

Probable calcium-binding protein CML40

Q9FNZ5

NIMIN-1 or At1g02450

✓

Protein NIM1-Interacting 1 (NIMIN-1)

Q38868

CPK9 or At3g20410

✓

Calcium-dependent protein kinase 9

Q9C7SO

BZIP60 or At1g42990

✓

bZIP transcription factor 60 (AtbZIP60)

O80397

MKK4 or At1g51660

✓

Mitogen-activated protein kinase kinase 4 (AtMKK4)

Q9L9T5

ATL2 or At3g16720

✓

RING-H2 finger protein ATL2 (Protein Arabidopsis Toxicos En Levadura 2)

Q9S745

PAD4 or EDS9 or At3g52430

✓

Lipase-like PAD4 (Protein Enhanced Disease Susceptibility 9)

Q42484

RPS2 or At4g26090

✓

Disease resistance protein RPS2 (Resistance to P-syringae protein 2)

Q9SN89

CML47 or At3g47480

✓

Probable calcium-binding protein CML47

Q9SU72

EDS1 or EDS1A or At3g48090

✓

Protein EDS1 (Enhanced Disease Susceptibility 1)

Q8L751

ORP1C or At4g08180

✓

Oxysterol-binding protein-related protein 1C

Q39234

TGA3 or BZIP22 or At1g22070

✓

Transcription factor TGA3 (AtbZIP22)

Q9SAH7

WRKY40 or At1g80840

✓

Probable WRKY transcription factor 40 (WRKY DNA-binding protein 40)

COLGJ1

At1g74360 or F1M20.4

✓

Threonine-protein kinase

Q84TG3

PUB23 or At2g35930

✓

Plant U-box protein 23

Q9FPHO

XBAT34 or At4g14365

✓

Putative E3 ubiquitin-protein ligase XBAT34

Q9SG86

BZIP28 or At3g10800

✓

bZIP transcription factor 28 (AtbZIP28)

Q9C7N2

CAD1 or At1g29690

✓

MACPF domain-containing protein CAD1 (Protein Constitutively Activated Cell Death 1)

Q9C9H6

RLP11 or At1g71390

✗

Putative disease resistance protein (Receptor like protein 11)

Q9SJQ8

At2g36470

✗

Expressed protein (Uncharacterized protein)

Q8RXN8

At5g42050

✗

Development and Cell Death (DCD)

Q8GYH5

ANK or At5g54610

✗

Ankyrin repeat family protein

Q9LN03

At1g08050

✗

C3HC4-type RING finger-containing protein

  1. The gene names are given in the second column whilst the full protein name as downloaded from the UniProt database [61] is given in the fourth column. A gene can have more than one name, but throughout this study we use the first names of each gene. The third column indicates whether the protein has been reviewed (i.e., manually curated: marked ✓) or not (✗)