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Fig. 4 | BMC Plant Biology

Fig. 4

From: Phylogenetic relationship and domain organisation of SET domain proteins of Archaeplastida

Fig. 4

Domain architecture of the Ash family. Schematic representation of Ash family proteins. Three major representative subgroups differing by the positioning of the SET domain and type of associated domain domains are shown along with an orphan group. These groups are further sub divided. The right side of the protein indicates the abbreviated form of the species sharing a particular protein architecture. Associated domains are indicated by different colored boxes with the names. AWS: Associated with SET; PHD: Plant homeodomain; PHD_NSD: Plant homeodomain found in nuclear receptor-binding SET domain-containing proteins; Zf-MYND: Myeloid nervy, deaf; Zf_C: Zinc binding motif composed of cysteine motif; TPR: Tetratricopeptide Repeat; Zf-CW: Zinc finger domain with conserved cysteine and tryptophan residues; TUDOR: Royal family protein; PLN03081: pentatricopeptide (PPR) repeat containing protein; PKC: Protein kinase catalytic domain; TNG2: T-cell leukemia neighbouring genes; ATP_11: Adenosine tri phosphate 11; PHA_03420: E4 protein; PHA02669: Hypothetical protein; CITED: CBP/p300-interacting transactivator with ED-rich tail, FAM196: Family of unknown function; SRI: Set2 Rbp1 interacting; Zf_R: Zn-finger in Ran binding protein and others; SoxC: Sry-related HMG box; Drf_FM1: Diaphanous related formin homology region1; Me425_SD1: Mediator complex 25 iynapsin 1; LIM: Lin11, Isl-1 & Mec-3. Domains are not drawn to scale. Scale bars indicate 100 amino acids. (At- Arabidopsis thaliana; Os-Oryza sativa; Pa-Picea abies; Sm-Selaginella meollendorffii; Pp-Physcomitrella patens; Mp-Marchantia polymorpha; Nm-Nitella mirabilis; Kf-Klebsormidium flaccidium; Mr.-Micromonas RCC299; Mpu-Micromonas pusila; Ot-Ostreococcus tauri; Ol-Ostreococcus lumiferans; Cv-Chlorella vulgaris; Cr-Chlamydomonas reinhardtii; Vc-Volvox carteri; Cp-Cyanophora paradoxa)

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