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Table 1 Classification of Class II-Ash proteins

From: Phylogenetic relationship and domain organisation of SET domain proteins of Archaeplastida

Class   Type Domain Architecture Species Extra Domains
At Os Pa Sm Pp Mp Nm Kf Mr Mpu Ot Ol Cv Cr Vc Cp
II II-1 1A AWS-SET + + + + + + + + + + TUDOR, PLN03081,
1B AWS-SET-PostSET + +  
II-2 2A PHD-PHD-PHD-AWS-SET + + +  
2B PHD-AWS-SET +  
II-3 3A ZnF_C2H2-AWS-SET-PostSET + + - + + + + ATP11, PHA03420, CITED, FAM196, SRI.
3B ZnF_C2H2-AWS-SET + + PHA, SOX, Drf_ FM1, Me425_SD1
3C ZnF_C2H2-AWS-SET- ZnF_C2H2 ZnF_C2H2 +  
II-Orphan SET + + + + + + + + + + LIM
  1. Ash proteins were classified into 4 classes, Class II-1 to Class II-3 and Class II-Orphan which were further divided into subclasses. The detailed domain arrangement with additional domains are shown. (At- Arabidopsis thaliana; Os-Oryza sativa; Pa-Picea abies; Sm-Selaginella meollendorffii; Pp-Physcomitrella patens; Mp-Marchantia polymorpha; Nm-Nitella mirabilis; Kf-Klebsormidium flaccidium; Mr.-Micromonas RCC299; Mpu-Micromonas pusila; Ot-Ostreococcus tauri; Ol-Ostreococcus lumiferans; Cv-Chlorella vulgaris; Cr-Chlamydomonas reinhardtii; Vc-Volvox carteri; Cp-Cyanophora paradoxa. Plus sign (+) and minus sign (−) indicate presence and absence of an above mentioned domain architecture