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Table 4 Gene ontology analysis for the top 100 downregulated genes in the flax genotypes resistant to Fusarium oxysporum (Dakota, #3896, #3896 × AP5, Dakota × AP5)

From: Differential gene expression in response to Fusarium oxysporum infection in resistant and susceptible genotypes of flax (Linum usitatissimum L.)

GO

category

Term

Observed number of genes

Expected number of genes

p-value

FDR

GO:0003777

microtubule motor activity

10

0.35

0

0

GO:0007018

microtubule-based movement

11

0.40

0

0

GO:0007017

microtubule-based process

15

1.15

1.2E-12

5.5E-09

GO:0005874

microtubule

15

1.16

1.4E-12

5.5E-09

GO:0005871

kinesin complex

9

0.30

4.8E-11

1.3E-07

GO:0006928

movement of cell or subcellular component

11

0.60

5.0E-11

1.3E-07

GO:0003774

motor activity

10

0.48

1.8E-10

4.0E-07

GO:0005875

microtubule associated complex

9

0.50

5.4E-09

1.1E-05

GO:0009524

phragmoplast

8

0.42

1.8E-08

3.1E-05

GO:0044430

cytoskeletal part

15

2.42

6.7E-08

1.0E-04

GO:0008574

ATP-dependent microtubule motor activity, plus-end-directed

4

0.06

4.4E-07

6.2E-04

GO:0000911

cytokinesis by cell plate formation

5

0.15

9.5E-07

1.2E-03

GO:0009506

plasmodesma

13

3.14

6.2E-06

7.4E-03

GO:0005911

cell-cell junction

13

3.24

9.2E-06

1.0E-02

GO:0030130

clathrin coat of trans-Golgi network vesicle

3

0.06

9.8E-06

1.0E-02

GO:0030054

cell junction

13

3.36

1.5E-05

1.4E-02

GO:0030132

clathrin coat of coated pit

3

0.06

1.7E-05

1.5E-02

GO:0030125

clathrin vesicle coat

3

0.07

2.8E-05

2.4E-02

GO:0030118

clathrin coat

3

0.08

4.9E-05

4.0E-02

GO:0005524

ATP binding

28

13.51

5.9E-05

4.3E-02

GO:0061640

cytoskeleton-dependent cytokinesis

4

0.18

5.9E-05

4.3E-02

GO:0032549

ribonucleoside binding

30

15.15

6.5E-05

4.3E-02

GO:1,902,410

mitotic cytokinetic process

5

0.35

6.6E-05

4.3E-02

GO:0001882

nucleoside binding

30

15.17

6.6E-05

4.3E-02

GO:0032559

adenyl ribonucleotide binding

28

13.66

7.1E-05

4.4E-02

GO:0030554

adenyl nucleotide binding

28

13.68

7.3E-05

4.4E-02

  1. Note: One gene can belong to more than one GO category. FDR – false discovery rate