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Table 1 Summary of RNA-seq read counts and mapping statistics

From: The comparison of alternative splicing among the multiple tissues in cucumber

Tissue

Raw reads

High-quality reads

Mapped reads

Unique mapped reads

Ovary

19,247,768

16,705,294

15,639,192

14,660,009

Expanded ovary under fertilization

18,466,067

16,438,206

15,290,470

14,273,961

Expanded ovary not fertilized

19,111,746

16,401,257

15,198,753

13,925,987

Root

18,732,466

16,378,025

15,275,644

14,117,427

Stem

24,535,215

22,825,990

21,248,383

19,439,971

Leaf

26,400,675

24,731,604

22,568,880

20,738,393

Male flower

26,050,858

24,438,476

22,788,799

21,120,178

Female flower

23,818,868

21,725,618

19,906,003

18,627,983

Tendril

22,472,146

20,302,220

18,789,694

17,743,431

Base part of tendril

21,653,855

19,360,735

17,902,815

16,919,102