Table 2 Overview of transcripts from the Cufflinks assembly
From: The comparison of alternative splicing among the multiple tissues in cucumber
Tissue | Transcripts | Transcripts encoded by annotated genes | Genes annotated |
|---|---|---|---|
Ovary | 39,133 | 26,515 | 18,373 |
Expanded ovary under fertilization | 38,777 | 26,272 | 18,308 |
Expanded ovary not fertilized | 39,255 | 27,175 | 18,485 |
Root | 38,442 | 26,421 | 18,572 |
Stem | 36,900 | 24,565 | 17,895 |
Leaf | 38,176 | 25,666 | 18,243 |
Male flower | 38,336 | 25,970 | 18,332 |
Female flower | 38,879 | 26,491 | 18,478 |
Tendril | 36,144 | 24,473 | 17,859 |
Base part of tendril | 35,973 | 24,406 | 17,877 |