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Fig. 2 | BMC Plant Biology

Fig. 2

From: Association of yield-related traits in founder genotypes and derivatives of common wheat (Triticum aestivum L.)

Fig. 2

Manhattan and Q-Q plots of six phenotypic traits with 3792 genome-wide SNP markers shown as dot plots of compressed MLM at P < 3.06 × 10− 4. Red horizontal line corresponds to the threshold value for significant association. Green and orange colors separate different chromosomes. Significantly associated SNP markers are labeled with blue dotted lines. (a) SNPs wsnp_Ex_c12048_19288999 and wsnp_Ku_c99567_87349060 associated with PH were consistently detected in 5 and 3 environments, respectively; (b) SNPs wsnp_Ex_rep_c67779_66463916, wsnp_Ex_c3463_6348659 and wsnp_Ex_c49211_53875575 associated with SL were consistently detected in 4, 3 and 6 environments, respectively; (c) SNPs associated with SNPS were detected in less than two environments; (d) both wsnp_Ku_c29102_39008953 and wsnp_Ex_c13154_20784674 associated with KNPS were detected in 3 environments; (e) SNP wsnp_Ex_c12341_19693570 associated with KWPS was detected in 3 environments; (f) SNP wsnp_Ku_rep_c69511_68887456 associated with TKW was detected in 4 environments

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