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Table 4 Comparative analysis of gene expression at different times of the day during development of different tissues. Differences

From: Diel pattern of circadian clock and storage protein gene expression in leaves and during seed filling in cowpea (Vigna unguiculata)

   

Tissue

   

Immature pods vs mature pods

Immature pods vs intermediate pods

Intermediate pods vs mature pods

Intermediate seeds vs mature seeds

 

Gene

Time

p -Value

Expression factor

SE(±)

p -Value

Expression factor

SE(iJ

p -Value

Expression factor

SE(±J

p-Value

Expression factor

SE(±)

Protein storage genes

VunCvc

T6

0.12

29.65

3.72

0.35

8.32

3.17

0.96

3.57

1.33

0.48

137.41

5.12

T12

0.02*

(−)16.99

2.29

0.97

1.25

0.14

0.06

(−)21.23

1.98

0.10

(−)1.56

0,57

T18

0 30

(−)4.30

1.00

0.20

4.24

0.94

0.03*

(−)21.69

1.63

0.52

32.03

5.12

T24

0.10

(−)3.77

1.07

0.83

(−)1.48

0.18

0.84

(−)2.70

0.29

0.99

(−)1.98

0,36

Vunleg

T6

0.47

(−)4.71

0.33

0.46

3.97

1.82

0.02*

(−)18.68

1.72

0.48

2.69

3.86

T12

0.24

(−)4.74

0.67

0.95

1.77

0.91

0.73

2.43

1.27

0.49

(−)1.85

1.46

T18

0.70

(−) l.36

0.18

0.60

(−)2.15

0.33

0.77

1.61

0.97

0.51

(−)1.40

1.19

T24

0.92

(−)8.77

1.60

0.63

(−)2.43

0.71

0.82

(−)3.54

0.26

0.96

(−)2.08

0,88

VunLegJ

T6

0.17

7.15

1.61

0.79

2.91

1.18

0.93

2.49

0.50

0.52

74.83

3.59

T12

0.30

(−)11.12

1.80

0.92

(−)3.96

1.13

0.54

(−)2.81

0.38

0.86

(−)8.74

0.59

T18

0.43

(−)2.06

0.47

0.15

15.87

2.06

0.51

(−)2.72

0.82

0.86

3.50

3.05

T24

0.97

2.15

0.95

0.93

1.71

0.38

0.92

1.26

0.75

0.95

(−)1.77

1.09

Clock genes

VunGI

T6

0.82

(−)1.65

0.27

0.72

(−)3.23

0.21

0.91

1.96

1.02

0.10

(−)5.20

0,85

T12

0.99

(−)1.21

0.31

0.57

(−)7.57

0.92

0.31

6.23

2.84

0.88

3.24

1.37

T18

0.10

(−)6.80

1.85

0.69

(−)3.03

0.42

0.86

(−)2.24

0.13

0.86

51.12

3.17

T24

0.08

3.50

1.07

0.80

1.58

0.19

0.40

2.21

1.34

0.99

6.35

1.23

VunTOC

T6

0.42

2.67

1.72

0.61

(−)2.11

0.28

0.40

5.65

1 98

0.98

(−)11.37

1.37

T12

0.99

1.60

1.02

0.97

(−)2.40

0.09

0.002 **

3.83

1.43

0.60

10.09

2.00

T18

0.03*

(−)17.57

2.22

0.65

2.09

1.52

0.56

(−)36.67

2.66

0.99

6.35

1.83

T24

0.88

(−)1.26

0.19

0.19

3.75

0.86

0.05

(−)2.97

0.08

0.83

5.97

0.58

VunlHY

T6

0.43

(−)4.27

0.44

0.33

(−)3.15

0.19

0.85

1.32

0.50

1.00

(−)1.07

0,88

T12

0.84

4.14

2.08

0.75

3.15

1.66

0.10

1.31

0.91

0.06

4.48

1.13

T18

0.07

(−)8.28

1.93

0.99

(−)1.36

0.45

0.89

(−)6.11

1.10

0.88

10.39

1.49

T24

0.37

3.04

1.77

0.68

2.75

11.80

0.96

1.10

0.07

0.99

1.80

1.47

VunElf3

T6

0.49

(−)2.78

0,73

0.001**

(−)3.98

0.33

0.51

1.42

8.89

0.001 **

105.26

7.68

T12

0.51

6.74

7.90

0.47

(−)1.12

2.86

0.001 **

17.79

5.11

0.49

12.07

4.18

T18

0.52

4.92

3.20

0.51

2.64

1.62

0.53

5.49

2.83

0.51

(−)23.89

1.78

T24

0.001**

40.62

1.58

0.52

33.35

1.28

0.001**

1354.72

1.85

0.51

5.71

13.36

  1. Significance level: * = p-Value≤0.05 and ** = p-Value ≤0.01