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Table 2 Expression analysis of select genes

From: Genome-wide (ChIP-seq) identification of target genes regulated by BdbZIP10 during paraquat-induced oxidative stress

 

Paraquat treatment compared to water

BdbZIP10-GFP OE

Compared to WT

Putative function

Phytozome/Panther

Gene Name

BdbZIP10-GFP OE

WT

Water

Paraquat

Bradi2g33110.1

0.2–0.48

0.24–0.33

2.0–4.1

2.1–4.9

Bradi2g33110.1.p - zinc ion transmembrane transporter activity

Bradi2g22520.1

0.28–0.62

2.1–2.8

52.8–93.1

8.1–18.2

Zinc ion transmembrane transporter activity

Bradi1g53680.1

0.05–0.14

0.24–1.17

30–123

5.4–18.1

High affinity zinc uptake

transmembrane transporter activity

Bradi3g17900.1

0.27–0.68

0.6–1.2

6.4–14.8

3.1–7.8

Zinc ion transmembrane

transporter activity

Bradi5g21580.1

0.16–0.25

0.8–1.2

1.1–2.4

1.0–1.4

High affinity zinc uptake

transmembrane transporter activity

Bradi1g68300

3.9–5.2

3.9–5.1

0.8–1.2

0.9–1.3

PTHR23310:SF14-Protein ACBP-7

Bradi1g37100

0.59–0.81

0.72–1.63

2.7–5.9

2.1–3.0

PF01152 – Bacterial-like globin; Thoredoxin peroxidase

Bradi1g49020

0.4–0.6

3.3–7.4

3.4–8.0

0.4–0.6

PTHR14209//PTHR14209:SF7- Isoamyl acetate-hydrolyzing esterase 1

Bradi3g41600

3.9–5.2

7.8–13.1

1.2–1.7

0.5–0.7

Stress up-regulated Nod19

(SURNod19)

  1. Comparison of gene expression levels between paraquat and water treated BdbZIP10 OE and wildtype plants. Gene expression level of BdbZIP10-GFP OE compared to wildtype plants. Numbers indicate the range of three independently BdbZIP10-GFP OE transformed lines, calculated using the standard deviation of the Ct values. Bold text indicates the most significant changes between BdbZIP10-GFP OE and wildtype plants