Skip to main content

Table 2 Significantly upregulated genes involved in photosynthesis

From: Transcriptomic analysis reveals vacuolar Na+ (K+)/H+ antiporter gene contributing to growth, development, and defense in switchgrass (Panicum virgatum L.)

Gene ID

log2Ratio (TG vs.WT)

Q value

Annotation

Chlorophyll biosynthesis and chloroplast development

Pavir. J25629

Inf

3.55 E-55

Involved in the chlorophyll biosynthesis

Pavir. J38707

9.5381

6.72 E-37

Involved in chlorophyll b degradation

Pavir. Ea00096

8.8125

1.41 E-26

Required for proper chloroplast degradation

Pavir. J16419

5.6144

4.95 E-03

Involved in the formation of chlorophyll

Pavir. J24058

8.5303

8.61 E-30

Regulate gene encoding chloroplast

Pavir. Ba03510

6.4468

6.14 E-05

Essential for chloroplast development

Pavir. Eb03460

4.8864

2.94 E-17

Light-induced chloroplast development

Pavir. J40341

3.8929

5.78 E-05

Regulate chloroplast photosynthetic capacity

Photosynthetic electron transporter and light-signal transduction

Pavir. J30556

Inf

1.59 E-17

Functions as an electron carrier in photosystem I

Pavir. J34572

Inf

1.14 E-40

Functions as an electron transporter

Pavir. J23449

3.0941

7.74 E-03

Electron transfer activity

Pavir. J24058

8.5303

8.61 E-30

Positive regulator of photomorphogenesis

Pavir. Eb03789

5.7887

8.07 E-12

Involved in light-signal transduction

Pavir. Ia02931

5.0042

8.51 E-04

Involved in light-signal transduction

Carbon dioxide fixation and NAD/NADP binding

Pavir. J05582

5.0109

2.59 E-04

Eliminate the photorespiratory loss of CO2

Pavir. Ca00150

3.5885

3.39 E-03

Involved in reversible hydration of CO2

Pavir. J18292

3.4094

9.05 E-26

Involved in carbon dioxide fixation

Pavir. J30434

Inf

5.72 E-06

Glycerol-3-phosphate dehydrogenase activity

Pavir. Ia04122

3.1439

7.00 E-03

Alcohol dehydrogenase (NAD) activity

Pavir. Ia04122

3.0679

3.79 E-03

D-3-phosphoglycerate dehydrogenase