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Table 4 Genes in the plant hormone signal transduction pathway with altered expression

From: Transcriptomic analysis reveals vacuolar Na+ (K+)/H+ antiporter gene contributing to growth, development, and defense in switchgrass (Panicum virgatum L.)

Hormone

Gene ID

log2Ratio (TG vs.WT)

Annotation

Auxin

Pavir.J19751

9.4224

Involved in auxin-activated signaling pathway

Pavir.Ga00493

3.4397

SAUR-like auxin-responsive protein; SAUR71

Pavir.J25610

3.4175

Auxin efflux carrier component 1b; PIN1B

Pavir.Fb01962

2.5885

Auxin-induced in root cultures protein; AIR12

Pavir.J32718

2.5492

Auxin response factor 5-like; ARF5

Cytokinin

Pavir.Ba01358

2.4615

Cytokinin ribosides 5′-monophosphates; LOGL9

Pavir.J18777

2.3612

Histidine containing phosphotransfer; AHP1

Pavir.Fa00713

−2.3029

Cytokinin dehydrogenase 11; CKX11

Gibberellin

Pavir.Cb00641

5.9078

Synthesis of gibberellin precursor; KS1

Pavir.Aa00893

2.6192

Gibberellin-regulated protein 3; GASA3

Ethylene

Pavir.Bb03119

Inf

Acts as a regulator of ethylene signaling; EIN4

Pavir.Ea01573

5.9235

Involved in the ethylene biosynthesis; ACO1

Pavir.Fa00424

−3.5140

Ethylene insensitive 3-like 3 protein; EIL3

Pavir.J10765

−3.1209

Reversion-to-ethylene-sensitivity1; RTE1

Salicylic acid

Pavir.Eb03507

7.9131

Mediating salicylic acid transcription; HBP1C

Pavir.Ha01753

3.4826

Salicylic acid-inducible transcription; TGA21

Abscisic acid

Pavir.Ib02120

3.3525

Abscisic acid 8′-hydroxylase 1; CYP707A5

Jasmonic acid

Pavir.J01580

Inf

Jasmonate ZIM domain-containing protein; JAZ

Brassinosteroid

Pavir.Fb01473

Inf

Brassinosteroid insensitive 1 protein; BRI1