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Table 1 Olive pollen superoxide dismutase (SOD) sequences retrieved from transcriptomic and genomic databases

From: Identification of novel superoxide dismutase isoenzymes in the olive (Olea europaea L.) pollen

Gene name

Type

Transcriptome

code a

Genome

code b

Arabidopsis orthologue (gene name)/Identity (%)c

Length (aa)

Mw (Da)/pI

Cellular localization

OeCSD1.1A

Cu,Zn

po11_olive_011703

OE6A103554T1

At1g08830 (AtCSD1)/83

152

15,306.96/5.76 d-e

Cytosol

OeCSD1.1B

Cu,Zn

po11_olive_018096

OE6A103554T1

At1g08830 (AtCSD1)/78

144

14,521.15/6.09 d-e

Cytosol

OeCSD1.2

Cu,Zn

po11_olive_018137

OE6A068806T1

At1g08830 (AtCSD1)/83

152

15,232.96/5.93 d-e

Cytosol

OeCSD1.3

Cu,Zn

po11_olive_027139

OE6A101614T3

At1g08830 (AtCSD1)/82

152

15,200.83/5.76 d-e

Cytosol

OeCSD2

Cu,Zn

po11_olive_021051

po11_olive_016542

OE6A004775T3

At2g28190 (AtCSD2)/63

230

23,426.38/6.23 d

23,434.39/6.23 e

Chloroplast

OeCSD3

Cu,Zn

po11_olive_018653

OE6A038482T1

At5g18100 (AtCSD3)/75

157

15,944.81/6.53 d

16,045.98/6.53 e

Peroxisome

OeFSD2

Fe

po11_olive_023570

OE6A023256T3

At5g51100 (AtFSD2)/64

306

35,002.29/5.40 d

35,051.27/5.24 e

Chloroplast

OeMSD1

Mn

po11_olive_008559

OE6A054770T1

At3g10920 (AtMSD1)/78

228

25,501.22/6.71 d-e

Mitochondria

  1. a Transcript codes from the olive (cv. ‘Picual’) pollen transcriptome database (http://reprolive.eez.csic.es)
  2. b Transcript codes from the olive (cv. ‘Farga’) genome database (http://denovo.cnag.cat/genomes/olive/)
  3. c Identity (%) between the olive SOD amino acid sequences and the corresponding Arabidopsis orthologues
  4. d-e Molecular weight (Da) and isoelectric point (pI) referred to the transcriptome (d) and genome (e) SOD amino acid sequences, respectively