Table 2 Read statistics of two degradome libraries
sRNA categories | Library I | Library II | ||
|---|---|---|---|---|
Taq numbers | Unique taqs | Taq numbers | Unique taqs | |
rRNA | 5100020 (27.42%) | 68908 (0.94%) | 3873416 (28.39%) | 63786 (1.13%) |
tRNA | 100 (0.00%) | 38 (0.00%) | 68 (0.00%) | 34 (0.00%) |
snRNA | 88 (0.00%) | 55 (0.00%) | 64 (0.00%) | 50 (0.00%) |
snoRNA | 787 (0.00%) | 165 (0.00%) | 548 (0.00%) | 148 (0.00%) |
polyN | 100640 (0.54%) | 77381 (1.05%) | 52561 (0.39%) | 37500 (0.67%) |
cDNA_sense | 5399536 (29.03%) | 2934822(39.96%) | 4135477 (30.31%) | 2393485 (42.46%) |
cDNA_antisense | 160933 (0.87%) | 70518 (0.96%) | 52400 (0.38%) | 28006 (0.50%) |
Other | 7837485 (42.14%) | 4193190 (57.09%) | 5528745 (40.52%) | 3113910 (55.24%) |
Total | 18599589 | 7345077 | 13643279 | 5636919 |