From: CsINV5, a tea vacuolar invertase gene enhances cold tolerance in transgenic Arabidopsis
ID | Gene name | Description | log2FC | |||
---|---|---|---|---|---|---|
WT vs OE | Normal vs Cold | |||||
Normal | Cold | WT | OE | |||
Specific up-regulated genes | ||||||
Response to cold | ||||||
AT1G20020 | ATLFNR2 | NADP (H) oxidoreductase | normal | 1.03 | normal | normal |
AT1G55490 | CPN60B | Chaperonin 60 beta | normal | 1.94 | 1.03 | 2.01 |
AT1G63940 | MDAR6 | Monodehydroascorbate reductase 6 | normal | 1.26 | normal | normal |
AT1G67090 | RBCS1A | Rubisco small subunit (RBCS) multigene family | normal | 1.37 | normal | normal |
AT2G35040 | AICARFT | IMPCHase bienzyme family protein | normal | 1.09 | normal | normal |
AT2G37190 | RPL12A | Ribosomal protein L11 family protein | normal | 1.02 | normal | normal |
AT2G37220 | – | Encodes a chloroplast RNA binding protein. | normal | 1.70 | normal | normal |
AT3G08000 | – | RNA-binding (RRM/RBD/RNP motifs) family protein | normal | 1.13 | normal | normal |
AT3G13470 | CPN60B2 | Chaperonin-60 beta2 | normal | 2.45 | normal | 2.10 |
AT3G23700 | SRRP1 | S1 RNA-binding ribosomal protein 1 | normal | 1.59 | normal | normal |
AT3G49910 | RPL26A | Translation protein SH3-like family protein | normal | 1.04 | normal | normal |
AT3G53460 | CP29 | Chloroplast RNA-binding protein 29 | normal | 2.34 | normal | 1.01 |
AT3G54050 | HCEF1 | Chloroplastic fructose 1, 6-bisphosphate phosphatase. | normal | 1.65 | normal | normal |
AT3G55280 | RPL23AB | Ribosomal protein L23A | normal | 1.00 | normal | 1.13 |
AT4G04330 | – | Homologue of cyanobacterial RBCX 1 | normal | 1.22 | normal | normal |
AT4G24280 | cpHsc70–1 | Chloroplast heat shock protein 70–1 | normal | 1.47 | normal | 1.31 |
AT5G20720 | CPN20 | Chaperonin 20 | normal | 1.71 | normal | 1.21 |
AT5G50250 | CP31B | Chloroplast RNA-binding protein 31B | normal | 1.17 | normal | 1.04 |
AT5G54770 | THI1 | Thiazole requiring | normal | 1.12 | normal | normal |
Response to osmotic | ||||||
AT1G02820 | ATLEA3 | Late embryogenesis abundant 3 (LEA3) family protein | normal | 1.40 | 4.77 | 4.95 |
AT1G73570 | – | HCP-like superfamily protein | normal | 1.53 | normal | 1.31 |
AT2G15970 | COR413-PM1 | Cold regulated 413 plasma memberane 1 | normal | 1.13 | 3.58 | 4.06 |
AT2G38230 | ATPDX1.1 | Pyrodoxine biosynthesis 1.1 | normal | 1.44 | normal | normal |
AT2G39800 | P5CS1 | Delta1-pyrroline-5-carboxylate synthase 1 | normal | 1.46 | normal | 1.83 |
AT2G42530 | COR15B | Cold regulated 15B | normal | 2.03 | 6.50 | 7.60 |
AT3G04770 | RPSAb | 40s ribosomal protein SA B | normal | 1.14 | normal | normal |
AT3G14940 | ATPPC3 | Cytosolic phosphoenolpyruvate carboxylase 3 | normal | 1.64 | 1.03 | 1.16 |
AT3G55610 | P5CS2 | Delta1-pyrroline-5-carboxylate synthase 2 | normal | 1.57 | normal | 2.47 |
AT5G01410 | PDX1 | Aldolase-type TIM barrel family protein | normal | 1.09 | normal | 1.22 |
AT5G44110 | ATPOP1 | Arabidopsis thaliana non-intrinsic ABC protein | normal | 1.05 | 4.91 | 5.25 |
Response to water deprivation | ||||||
AT1G02205 | CER1 | Fatty acid hydroxylase superfamily | normal | 1.12 | 7.08 | 4.89 |
AT2G04030 | CR88 | Heat shock protein 88 | normal | 1.81 | normal | 1.80 |
AT3G08000 | – | RNA-binding (RRM/RBD/RNP motifs) family protein | normal | 1.13 | normal | normal |
Specific down-regulated genes | ||||||
Response to cold | ||||||
AT1G01560 | ATMPK11 | Member of MAP Kinase family | normal | −1.11 | 1.19 | normal |
AT1G18890 | ATCDPK1 | Calcium-dependent protein kinase 1 | normal | −1.17 | 2.02 | 1.48 |
AT1G29690 | CAD1 | Constitutively activated cell death 1 | normal | −1.82 | 2.12 | normal |
AT1G51660 | ATMKK4 | Mitogen-activated protein kinase kinase 4 | normal | −1.12 | normal | normal |
AT1G52890 | ANAC019 | NAC domain containing protein19 | normal | −2.73 | 1.98 | normal |
AT1G66400 | CML23 | Calmodulin-like protein | normal | −2.24 | 2.12 | normal |
AT2G04430 | atnudt5 | Nudix hydrolase homolog 5 | normal | −1.81 | 2.24 | normal |
AT2G04450 | ATNUDT6 | Nucleoside diphosphates linked to some moiety X 6 | normal | −1.74 | 3.83 | 2.12 |
AT2G17290 | CPK6 | Calcium-dependent protein kinase family protein | normal | −1.28 | 1.13 | normal |
AT2G22300 | CAMTA3 | Calcium-binding transcription activator 3 | normal | −1.04 | normal | normal |
AT2G30250 | WRKY25 | WRKY DNA-binding protein | normal | −1.59 | 1.17 | normal |
AT2G38470 | WRKY33 | normal | −2.53 | 2.29 | normal | |
AT2G40140 | CZF1 | Salt-inducible zinc finger 2 | normal | −1.38 | 2.93 | 2.30 |
AT3G03050 | CSLD3 | Cellulose synthase like D3 | normal | −1.02 | 1.04 | normal |
AT3G05360 | AtRLP30 | Receptor like protein 30 | normal | −1.84 | 2.77 | 1.86 |
AT3G11820 | SYP121 | Syntaxin related protein 1 | normal | −1.42 | 1.28 | normal |
AT3G49530 | ANAC062 | NAC domain containing protein 62 | normal | −1.70 | 2.41 | 1.03 |
AT3G52400 | SYP122 | Syntaxin of plants 122 | normal | −2.56 | 2.19 | normal |
AT4G02330 | ATPMEPCRB | Pectin methylesterase 41 | normal | −1.63 | 2.54 | 1.27 |
AT4G08500 | MEKK1 | MAPK/ERK Kinase Kinase 1 | normal | −1.33 | 1.22 | normal |
AT4G25490 | CBF1 | C-repeat/DRE binding factor 1 | normal | −1.26 | 4.98 | 3.72 |
AT4G26120 | NPR2 | Ankyrin repeat family protein | normal | −2.03 | 1.99 | normal |
AT5G01600 | ATFER1 | Arabidopsis thaliana ferretin 1 | normal | −1.45 | 1.84 | 1.03 |
AT5G01820 | ATSR1 | Serine/Threonine protein Kinase 1 | normal | −1.16 | 1.47 | normal |
AT5G02490 | MED37D | Heat shock protein 70 (Hsp 70) family protein | normal | −2.12 | 4.70 | 3.01 |
AT5G13320 | PBS3 | AVRPPHB susceptible 3 | normal | −3.20 | 3.67 | normal |
AT5G16910 | ATCSLD2 | Cellulose-synthase like D2 | normal | −1.40 | 1.61 | 1.08 |
AT5G26920 | CBP60G | CAM-binding protein 60-like G | normal | −3.69 | 3.62 | normal |
AT5G42050 | NRP | Asparagine-rich protein | normal | −1.33 | 1.58 | normal |
AT5G57560 | TCH4 | Xyloglucan endotransglucosylase/hydrolase 22 | normal | −2.72 | 2.65 | 1.22 |
AT5G58670 | ATPLC1 | Arabidopsis thaliana phospholipase C | normal | −1.04 | normal | normal |
AT5G67340 | PUB2 | ARM repeat superfamily protein | normal | −2.32 | 3.82 | 2.01 |
Response to osmotic | ||||||
AT1G15520 | PDR12 | Arabidopsis thaliana ATP-binding cassette G40 | normal | −3.13 | 2.13 | normal |
AT1G57560 | AtMYB50 | MYB domain protein | nd | −2.90 | 2.63 | normal |
AT3G06490 | MYB108 | normal | −2.81 | 1.42 | normal | |
AT3G10500 | anac053 | NAC domain containing protein 53 | normal | −1.38 | normal | normal |
AT3G14050 | RSH2 | RELA/SPOT homolog 2 | normal | −2.10 | 2.21 | 1.04 |
AT3G22160 | JAV1 | Jasmonate-associated VQ motif gene 1 | normal | −1.19 | 1.04 | normal |
AT3G28210 | PMZ | Encodes a putative zinc finger protein | normal | −2.91 | 3.00 | normal |
AT4G15120 | – | VQ motif-containing protein | normal | −2.57 | 3.07 | normal |
AT4G34390 | XLG2 | Extra-large GTP-binding protein 2 | normal | −2.27 | 1.80 | normal |
AT4G36990 | HSF4 | Haliana heat shock factor 4 | normal | −1.19 | 0.51 | normal |
AT5G13170 | SAG29 | Senescense-associated gene29 | normal | −3.53 | 6.25 | 3.12 |
AT5G39720 | AIG2L | Avirulence induced protein 2 like protein | nd | −2.90 | 2.82 | normal |
Response to water deprivation | ||||||
AT1G08920 | ESL1 | Early response to dehydration SIX-like 1 | normal | −1.76 | 3.42 | 2.14 |
AT1G02930 | GSTF6 | Arabidopsis thaliana gluatione s-transferase F3 | normal | −1.54 | normal | normal |
AT1G32870 | ANAC13 | NAC domain containing protein 13 | normal | −1.12 | 2.56 | 1.74 |
AT1G32940 | ATSBT3.5 | Subtilase family protein | normal | −1.82 | 2.37 | 1.42 |
AT1G32950 | – | normal | −3.30 | 4.69 | 1.15 | |
AT1G54160 | NFYA5 | Nuclear factor Y A5 | normal | −1.29 | 1.80 | 1.20 |
AT2G38340 | DREB19 | Dehyration response element-binding protein 19 | normal | −2.62 | 2.20 | normal |
AT2G45570 | CYP76C2 | Cytochrome P450 | normal | −2.14 | 2.71 | 1.41 |
AT3G56880 | – | VQ motif-containing protein | normal | −1.33 | 1.80 | normal |
AT4G12250 | GAE5 | UDP-D-glucuronate 4-epimerase | normal | −1.26 | 1.50 | normal |
AT5G54730 | ATATG18F | Yeast autophagy 18 F-like protein | normal | −1.04 | 1.26 | normal |