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Fig. 3 | BMC Plant Biology

Fig. 3

From: Combined linkage and association mapping reveal QTL for host plant resistance to common rust (Puccinia sorghi) in tropical maize

Fig. 3

Genome-wide association mapping of common rust resistance with 32,051 SNPs in Drought Tolerant Maize for Africa (DTMA) panel. The vertical axis indicates –log10 of P-value scores, and the horizontal axis indicates chromosomes and physical positions of SNPs. The dashed lines correspond to the thresholds of Bonferroni correction (P < 3 × 10− 5). The Manhattan plots for significant SNP marker for different environments and disease evalution parameter. (a) One SNP marker on Chr. 6 associated with FDR in EK09; b) 3 SNP markers on Chr.1 associated with FDR in BM10; c) 3 SNP markers on Chr.3 and Chr.8 associated with FDR in BM11; d) 2 SNP markers on Chr.1 associated with MDR in BM10; e) 5 SNP markers on Chr.3 and Chr.8 associated with MDR in BM11, respectively; f) 14 SNP markers on Chr.5, Chr.8 and Chr.10 associated with AUDPC ted in BM09A; g) 3 SNP markers on Chr.1 associated with AUDPC d in BM10; h) 6 SNP markers on Chr.3 and 8 associated with AUDPC BM11., respectively

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