Table 2 The microRNAs regulating rapeseed PEPC gene (BnaA03g33640D) and soybean LPAAT2 gene (Glyma.03G139700)
miRNA_Acc. | Target_Acc. | Expectation | UPE | miRNA_start | miRNA_end | Target_start | Target_end | miRNA_aligned_fragment | Target_aligned_fragment | Inhibition |
|---|---|---|---|---|---|---|---|---|---|---|
bna-miR169a | BnaA03g33640D | 4 | 21.988 | 1 | 20 | 204 | 223 | CAGCCAAGGAUGACUUGCCG | AGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169b | BnaA03g33640D | 4 | 21.988 | 1 | 20 | 204 | 223 | CAGCCAAGGAUGACUUGCCG | AGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169c | BnaA03g33640D | 3.5 | 21.988 | 1 | 20 | 204 | 223 | UAGCCAAGGAUGACUUGCCU | AGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169d | BnaA03g33640D | 3.5 | 21.988 | 1 | 20 | 204 | 223 | UAGCCAAGGAUGACUUGCCU | AGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169e | BnaA03g33640D | 3.5 | 21.988 | 1 | 20 | 204 | 223 | UAGCCAAGGAUGACUUGCCU | AGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169f | BnaA03g33640D | 3.5 | 21.988 | 1 | 20 | 204 | 223 | UAGCCAAGGAUGACUUGCCU | AGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169g | BnaA03g33640D | 3.5 | 21.988 | 1 | 22 | 202 | 223 | UAGCCAAGGAUGACUUGCCUGC | GAAGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169h | BnaA03g33640D | 3.5 | 21.988 | 1 | 22 | 202 | 223 | UAGCCAAGGAUGACUUGCCUGC | GAAGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169i | BnaA03g33640D | 3.5 | 21.988 | 1 | 22 | 202 | 223 | UAGCCAAGGAUGACUUGCCUGC | GAAGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169j | BnaA03g33640D | 3.5 | 21.988 | 1 | 22 | 202 | 223 | UAGCCAAGGAUGACUUGCCUGC | GAAGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169k | BnaA03g33640D | 3.5 | 21.988 | 1 | 22 | 202 | 223 | UAGCCAAGGAUGACUUGCCUGC | GAAGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169l | BnaA03g33640D | 3.5 | 21.988 | 1 | 22 | 202 | 223 | UAGCCAAGGAUGACUUGCCUGC | GAAGGCAAGCCAAACUUGGCUG | Translation |
bna-miR169n | BnaA03g33640D | 4 | 21.988 | 1 | 20 | 204 | 223 | CAGCCAAGGAUGACUUGCCG | AGGCAAGCCAAACUUGGCUG | Translation |
gma-miR171b-3p | Glyma.03G139700 | 3 | 24.213 | 1 | 20 | 168 | 186 | CGAGCCGAAUCAAUAUCACU | AGUGAUAUUGAUU-GGCUUG | Cleavage |
gma-miR1516a-5p | Glyma.03G139700 | 3 | 24.131 | 1 | 23 | 283 | 305 | CAAGUUAUAAGCUCUUUUGAGAG | CUCUCAAAAGCACUUAUGGCUUG | Cleavage |
gma-miR1516b | Glyma.03G139700 | 1 | 14.793 | 1 | 21 | 264 | 284 | AGCUUCUCUACAGAAAAUAUA | UAUAUUUUCAGUAGAGAAGCU | Cleavage |
gma-miR5775 | Glyma.03G139700 | 3 | 23.458 | 1 | 21 | 279 | 299 | AUAAGCUCUUUUGAGAGCUUC | GAAGCUCUCAAAAGCACUUAU | Cleavage |
gma-miR171b-3p | Glyma.19G142500 | 3 | 22.553 | 1 | 20 | 210 | 228 | CGAGCCGAAUCAAUAUCACU | AGUGAUAUUGAUU-GGCUUG | Cleavage |