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Table 1 The diagnostic primers, distinguishing the dominant and recessive alleles of the Ant1 and Ant2 genes

From: Purple-grained barley (Hordeum vulgare L.): marker-assisted development of NILs for investigating peculiarities of the anthocyanin biosynthesis regulatory network

Gene

Chromo-some

Primer pair (5′ → 3′)

Annealing temperature, °C

PCR product length (nt) in Bowman/BW648

Accessions

Ant1

7HS

F: gtttgccaaaggtctatgtga

R: atgaaattcaggaaggtcgt

55

223/248

KP265976–79, barke_contig_1832333, bowman_contig_75050, morex_contig_137164

Ant2

2HL

F: gccgtgtgtttccttagtt

R: cgagccaacaacaagcgagac

55

447/268

KX035100, barke_contig_2804331, bowman_contig_857662, morex_contig_1573231

  1. The primers were designed based on the sequences retrieved from NCBI and IPK Barley BLAST Server (http://webblast.ipk-gatersleben.de/barley_ibsc/viroblast.php)