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Fig. 1 | BMC Plant Biology

Fig. 1

From: Inferring the regulatory network of the miRNA-mediated response to biotic and abiotic stress in melon

Fig. 1

Analysis of the sRNA population recovered from analyzed melon libraries. a Principal component analysis based on sRNAs accumulation in replicates of melon-plants exposed to diverse stress treatments. The statistical significance was estimated by Mann-Whitney-Wilcoxon test, considering the inter- and intra-group Euclidean distances. b Diagram showing the relative accumulation (and distribution of the total clean reads of melon sRNAs ranging between 20 and 25 nt obtained from the 24 sequenced libraries. The control and the different analyzed treatments are represented with colors. The shown values represent the sum of all repetitions. c Venn diagram comparing the number of the differential sRNAs -estimated by DESeq2 (green), edgeR (red) and NOIseq (blue)- expressed in melon in response to cold, drought, salinity, Short Day, Monosporascus (Mon), HSVd and Agrobacterium (Agro) treatments. Only the sRNAs predicted as differential by all three analysis methods were considered as true stress-responsive miRNAs

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