Table 1 Genome-wide identification of circRNAs in cucumber
From: Identification of cucumber circular RNAs responsive to salt stress
Sample | Total read | Total nucleotide | Unique mapped read | Junction read | CircRNA |
|---|---|---|---|---|---|
CK-L1 | 64,941,534 | 9,730,914,122 | 59,683,975 (91.90%) | 4115 (0.006%) | 337 |
CK-L2 | 47,247,952 | 7,078,390,750 | 43,533,334 (92.14%) | 3223 (0.007%) | 344 |
Na-L1 | 52,711,124 | 7,897,509,504 | 48,504,173 (92.02%) | 2814 (0.005%) | 277 |
Na-L2 | 56,139,180 | 8,410,167,314 | 51,545,903 (91.82%) | 3610 (0.006%) | 288 |
CK-R1 | 55,226,326 | 8,245,076,746 | 37,769,894 (68.39%) | 28,936 (0.052%) | 807 |
CK-R2 | 48,243,900 | 7,210,362,462 | 33,538,249 (69.52%) | 29,102 (0.060%) | 924 |
Na-R1 | 55,918,188 | 8,351,234,926 | 23,369,033 (41.79%) | 45,248 (0.081%) | 819 |
Na-R2 | 65,369,878 | 9,767,970,292 | 36,585,168 (55.97%) | 37,162 (0.057%) | 909 |
All | 445,798,082 | 66,691,626,116 | 334,529,729 | 154,210 | 2787 |