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Table 1 The information of EIN3/EILs in B. napus and its diploid progenitors with their Arabidopsis orthologs

From: Genome-wide identification and analysis of the EIN3/EIL gene family in allotetraploid Brassica napus reveal its potential advantages during polyploidization

Gene name

BRAD ID

Chromosome

Strand

Block

CDs (bp)

Orthologous gene

No.

Start

End

BrEIL1

Bra000528

A03

11,612,582

11,614,297

+

I

1716

AT2G27050

BrEIL2

Bra002358

A10

10,160,414

10,161,946

–

R

1533

AT5G21120

BrEIL3a

Bra015970

A07

23,293,714

23,295,723

–

E

1764

AT1G73730

BrEIL3b

Bra003831

A07

18,534,952

18,536,782

+

E

1659

AT1G73730

BrEIL3c

Bra008110

A02

12,192,159

12,193,778

–

E

1620

AT1G73730

BrEIL4a

Bra028601

A02

1,519,950

1,521,317

+

R

1368

AT5G10120

BrEIL4b

Bra006050

A03

1,762,948

1,764,210

+

R

990

AT5G10120

BoEIL1

Bol032895

C06

5,998,916

6,000,631

+

I

1716

AT2G27050

BoEIL2a

Bol036088

C02

5,947,506

5,949,050

+

R

1545

AT5G21120

BoEIL2b

Bol035762

C09

29,569,796

29,571,388

–

R

1593

AT5G21120

BoEIL3a

Bol026238

C06

3,515,537

3,517,637

+

E

1758

AT1G73730

BoEIL3b

Bol039991

C06

33,246,791

33,248,491

+

E

1701

AT1G73730

BoEIL4a

Bol024640

C02

2,716,756

2,718,117

+

R

1362

AT5G10120

BoEIL4b

Bol008759

C03

1,888,488

1,889,829

+

R

1074

AT5G10120

BnCEIN3

BnaC01g32460D

chrC01

31,744,455

31,747,102

+

F

1764

AT3G20770

BnCEIL1a

BnaC03g26570D

chrC03

15,142,985

15,145,564

+

I

1692

AT2G27050

BnAEIL1b

BnaA03g22560D

chrA03

10,717,296

10,719,627

+

I

1713

AT2G27050

BnAEIL2a

BnaA10g14470D

chrA10

11,504,970

11,506,502

–

R

1500

AT5G21120

BnCEIL2b

BnaCnng35080D

chrCnn_random

33,278,634

33,280,328

–

R

1530

AT5G21120

BnAEIL3a

BnaA07g39030D

chrA07_random

1,960,115

1,962,709

–

E

1764

AT1G73730

BnCEIL3b

BnaC06g34570D

chrC06

33,988,588

33,991,257

–

E

1758

AT1G73730

BnCEIL3c

BnaC06g23450D

chrC06

25,297,162

25,299,268

+

E

1698

AT1G73730

BnAEIL3d

BnaA02g16550D

chrA02

9,876,349

9,880,706

–

E

1749

AT1G73730

BnCEIL4a

BnaC02g00520D

chrC02

216,092

217,453

–

R

1362

AT5G10120

BnAEIL4b

BnaA02g00350D

chrA02

129,692

131,059

+

R

1368

AT5G10120

BnCEIL4c

BnaC03g04150D

chrC03

1,999,482

2,000,328

+

R

579

AT5G10120

BnAEIL4d

BnaA03g02810D

chrA03

1,359,358

1,360,620

+

R

990

AT5G10120