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Table 5 The expression patterns of EIN3/EIL gene pairs with potential direct evolutionary relationships

From: Genome-wide identification and analysis of the EIN3/EIL gene family in allotetraploid Brassica napus reveal its potential advantages during polyploidization

Clade

Gene pairs with evolutionary relationship

Flowers_FPKM

Leaves_FPKM

Siliques_FPKM

Stems_FPKM

Gene structurea

A1 sub-clade

BoEIL1

28.80

27.85

32.86

50.47

S

BnAEIL1b

0

0

0

0

B3 sub-clade

BrEIL3a

11.38

9.53

7.79

6.19

S

BnAEIL3a

5.37

0.00

4.87

5.02

BoEIL3a

19.85

8.06

15.98

14.05

S

BnCEIL3b

5.36

5.62

5.56

5.16

BrEIL3c

0.31

0.04

0.08

0

D

BnAEIL3d

0.59

0.28

0.48

0.47

BoEIL3b

9.75

3.84

6.78

6.23

D

BnCEIL3c

3.74

4.39

1.93

2.38

C1 sub-clade

BrEIL2

0.12

0.09

0.29

0.12

D

BnAEIL2a

0

0

0.06

0.16

BoEIL2b

0.02

0

1.30

0.06

D

BnCEIL2b

0

0

0.02

0.15

C3 sub-clade

BrEIL4a

0

0

0

0

S

BnAEIL4b

0

0

0

0

BoEIL4a

0

0

0.03

0.05

S

BnCEIL4a

0

0

0

0

BrEIL4b

0

0

0

0

S

BnAEIL4d

0

0

0

0

BoEIL4b

0.76

0.13

1.11

0.67

S

BnCEIL4c

0

0.08

0.22

0

  1. aGene structure was used to show whether the gene pairs had the same intron/exon structure. S represented they have same gene structure and D represented they have different gene structure