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Table 1 MADS-box gene family identified in Brassica oleracea

From: Genome wide analysis of MADS-box gene family in Brassica oleracea reveals conservation and variation in flower development

Gene name

Gene locus

Chr. no.

Protein

No. of introns

pI

Group

Length/aa

Mol.wt./Kda

BolMADS1

(BoFUL-a)

Bol007763

Scaffold256

241

27.41

7

9.36

MIKCc

BolMADS2

(BoFUL-b)

Bol017059

C07

241

27.52

7

9.46

MIKCc

BolMADS3

(BoFUL-c)

Bol036265

C09

241

27.43

7

9.31

MIKCc

BolMADS4

Bol029887

C03

247

28.14

7

9.62

MIKCc

BolMADS5

Bol030482

C09

253

28.83

6

8.56

MIKCc

BolMADS6

Bol041762

C07

252

29.29

7

7.71

MIKCc

BolMADS7

Bol011058

C04

259

29.14

7

5.49

MIKCc

BolMADS8

Bol024219

Scaffold93_P1

240

27.42

6

7.14

MIKCc

BolMADS9

Bol020052

C02

160

18.69

3

9.62

MIKCc

BolMADS10

(BoCAL)

Bol024957

C03

218

25.72

6

9.33

MIKCc

BolMADS11

Bol034251

C03

263

29.87

7

8.90

MIKCc

BolMADS12

Bol029555

C03

160

18.61

4

9.56

MIKCc

BolMADS13

Bol023763

C06

248

28.41

6

9.11

MIKCc

BolMADS14

Bol004959

C04

248

28.35

6

8.77

MIKCc

BolMADS15

Bol037657

Scaffold24

221

24.97

7

6.78

MIKCc

BolMADS16

Bol033138

C02

89

10.37

0

10.53

MIKCc

BolMADS17

Bol036252

C09

245

29.04

5

6.57

MIKCc

BolMADS18

Bol017090

C07

251

29.59

5

7.33

MIKCc

BolMADS19

Bol025193

C08

232

27.27

6

8.71

MIKCc

BolMADS20

Bol032290

C09

248

28.09

7

9.22

MIKCc

BolMADS21

Bol041644

Scaffold9_P1

224

26.51

6

7.85

MIKCc

BolMADS22

Bol008758

C03

216

24.28

5

9.10

MIKCc

BolMADS23

Bol043693

C09

130

14.54

2

9.57

MIKCc

BolMADS24

Bol028071

C03

202

23.16

6

9.36

MIKCc

BolMADS25

Bol003519

Scaffold348

212

24.03

6

6.35

MIKCc

BolMADS26

Bol034952

C02

211

23.90

6

7.66

MIKCc

BolMADS27

Bol002366

Scaffold392

211

23.97

6

6.85

MIKCc

XP_013590290.1 a

(BoAP1-c)

XP_013590290.1

/

256

30.13

7

8.31

MIKCc

XP_013589842.1

(BoAP1-a)

XP_013589842.1

/

256

30.18

7

8.00

MIKCc

XP_013600280.1

XP_013600280.1

/

241

27.20

8

6.07

MIKCc

XP_013631060.1

XP_013631060.1

/

241

27.25

8

6.08

MIKCc

XP_013597287.1

XP_013597287.1

/

252

28.79

8

9.81

MIKCc

XP_013626307.1

XP_013626307.1

/

208

24.09

5

9.41

MIKCc

XP_013607408.1

XP_013607408.1

/

208

24.15

5

9.16

MIKCc

XP_013630326.1

XP_013630326.1

/

213

24.42

7

9.48

MIKCc

XP_013632159.1

XP_013632159.1

/

213

24.37

7

9.82

MIKCc

BolMADS28

Bol042006

Scaffold8_P1

335

38.03

9

4.95

MIKC*

BolMADS29

Bol027523

C06

329

37.65

9

5.03

MIKC*

BolMADS30

Bol013125

C01

207

23.94

6

9.56

MIKC*

BolMADS31

Bol013192

C08

338

38.88

10

6.09

MIKC*

BolMADS32

Bol007216

C07

389

44.21

10

6.86

MIKC*

BolMADS33

Bol023922

C06

406

46.31

8

5.80

MIKC*

BolMADS34

Bol008953

C02

257

29.09

1

9.28

Mα

BolMADS35

Bol026349

C06

213

24.22

0

5.48

Mα

BolMADS36

Bol037864

C04

187

21.32

0

5.07

Mα

BolMADS37

Bol008951

C02

123

14.29

0

9.90

Mα

BolMADS38

Bol008950

C02

120

13.98

0

9.95

Mα

BolMADS39

Bol009782

C08

206

23.45

0

9.37

Mα

BolMADS40

Bol031566

C08

162

18.43

0

8.74

Mα

BolMADS41

Bol001956

Scaffold412

176

20.03

0

6.98

Mα

BolMADS42

Bol033229

C04

240

27.83

1

9.47

Mα

BolMADS43

Bol022502

C05

171

19.07

0

5.4

Mα

BolMADS44

Bol019111

Scaffold133

189

21.44

0

9.15

Mα

BolMADS45

Bol044870

C06

256

28.53

0

4.43

Mα

BolMADS46

Bol015619

C06

247

27.56

0

4.40

Mα

BolMADS47

Bol001334

Scaffold454

193

22.36

0

9.03

Mα

BolMADS48

Bol023453

C08

268

29.59

0

4.76

Mα

BolMADS49

Bol023443

C08

268

29.58

0

4.76

Mα

BolMADS50

Bol023442

C08

268

29.57

0

4.76

Mα

BolMADS51

Bol002451

Scaffold388

364

40.07

0

4.51

Mα

BolMADS52

Bol014335

C03

198

21.87

0

4.93

Mα

BolMADS53

Bol014328

C03

247

27.44

0

5.17

Mα

BolMADS54

Bol001745

Scaffold424

263

29.06

0

4.08

Mα

BolMADS55

Bol016615

Scaffold153

325

36.41

0

4.28

Mα

BolMADS56

Bol016587

Scaffold153

285

32.00

0

4.97

Mα

BolMADS57

Bol009950

C04

359

39.83

0

4.39

Mα

BolMADS58

Bol009965

C04

159

17.76

0

6.12

Mα

BolMADS59

Bol030956

C01

344

39.50

0

8.33

Mβ

BolMADS60

Bol016846

C09

301

35.04

0

8.66

Mβ

BolMADS61

Bol022880

C03

127

14.73

0

8.42

Mβ

BolMADS62

Bol002990

Scaffold367

356

40.68

0

8.83

Mβ

BolMADS63

Bol027893

C03

274

31.42

0

8.44

Mβ

BolMADS64

Bol008049

C02

342

39.28

0

9.46

Mβ

BolMADS65

Bol012873

Scaffold192

324

37.21

0

5.69

Mβ

BolMADS66

Bol012871

Scaffold192

305

35.22

0

6.45

Mβ

BolMADS67

Bol037792

C04

82

9.52

1

5.23

Mβ

BolMADS68

Bol044867

C06

250

28.54

0

6.96

Mβ

BolMADS69

Bol012124

C04

178

20.55

0

9.58

Mβ

BolMADS70

Bol010353

C05

345

39.35

0

7.14

Mγ

BolMADS71

Bol012341

C07

157

18.42

0

9.85

Mγ

BolMADS72

Bol012715

Scaffold194_P1

395

44.69

0

5.72

Mγ

BolMADS73

Bol012716

Scaffold194_P1

395

44.64

0

5.54

Mγ

BolMADS74

Bol012712

Scaffold194_P1

395

44.72

0

5.61

Mγ

BolMADS75

Bol023555

Scaffold99_P1

162

18.89

0

9.8

Mγ

BolMADS76

Bol002873

Scaffold372

334

36.96

0

8.3

Mγ

BolMADS77

Bol022282

C07

375

42.74

0

5.25

Mγ

BolMADS78

Bol004579

C02

308

35.23

1

8.73

Mγ

BolMADS79

Bol024509

C02

252

28.89

0

5.43

Mγ

BolMADS80

Bol002483

Scaffold387

344

39.14

1

5.65

Mγ

BolMADS81

Bol043965

C09

191

21.98

0

5.05

Mγ

BolMADS82

Bol036538

C01

278

32.27

1

4.95

Mγ

  1. aThe genes of XP series were found in NCBI database, and there was no location information of B. oleracea genome