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Table 4 The top 50 GO terms being downregulated by TBM

From: How exposure to ALS-inhibiting gametocide tribenuron-methyl induces male sterility in rapeseed

GO Id GO_term S gene number B gene number P value of Fisher’s Exact Test
GO:0008289 Lipid binding 32 384 0
GO:0006869 Lipid transport 27 388 0
GO:0009505 Plant-type cell wall 28 655 3.87E-14
GO:0009715 Chalcone biosynthetic process 7 16 8.68E-12
GO:0009629 Response to gravity 7 16 8.68E-12
GO:0016210 Naringenin-chalcone synthase activity 7 16 8.68E-12
GO:0016298 Lipase activity 10 63 2.37E-11
GO:0031540 Regulation of anthocyanin biosynthetic process 7 24 2.50E-10
GO:0043169 Cation binding 13 192 1.34E-09
GO:0016788 Hydrolase activity, acting on ester bonds 12 181 7.36E-09
GO:0009813 Flavonoid biosynthetic process 8 58 7.79E-09
GO:0016747 Transferase activity, transferring acyl groups other than amino-acyl groups 11 166 3.15E-08
GO:0016746 Transferase activity, transferring acyl groups 9 107 7.41E-08
GO:0006629 Lipid metabolic process 13 278 1.09E-07
GO:0019953 Sexual reproduction 6 39 3.12E-07
GO:0080088 Spermidine hydroxycinnamate conjugate biosynthetic process 3 3 3.46E-07
GO:0080074 Spermidine:caffeoyl COA N-acyltransferase activity 3 3 3.46E-07
GO:0016410 N-acyltransferase activity 3 3 3.46E-07
GO:0080075 Spermidine:feruloyl COA N-acyltransferase activity 3 3 3.46E-07
GO:0080073 Spermidine:coumaroyl COA N-acyltransferase activity 3 3 3.46E-07
GO:0019915 Lipid storage 6 48 1.11E-06
GO:0080072 Spermidine:sinapoyl COA N-acyltransferase activity 3 4 1.38E-06
GO:0050734 Hydroxycinnamoyl transferase activity 3 4 1.38E-06
GO:0009859 Pollen hydration 4 13 1.64E-06
GO:0004869 Cysteine-type endopeptidase inhibitor activity 5 33 3.39E-06
GO:0009926 Auxin polar transport 7 90 3.63E-06
GO:0010584 Pollen exine formation 6 60 4.22E-06
GO:0004553 Hydrolase activity, hydrolyzing O-glycosyl compounds 13 392 5.09E-06
GO:0010224 Response to UV-B 7 101 7.83E-06
GO:0005788 Endoplasmic reticulum lumen 5 41 1.02E-05
GO:0008610 Lipid biosynthetic process 5 42 1.15E-05
GO:0009705 Plant-type vacuole membrane 8 149 1.16E-05
GO:0009733 Response to auxin stimulus 12 376 1.72E-05
GO:0042409 Caffeoyl-COA O-methyltransferase activity 3 10 4.00E-05
GO:0005576 Extracellular region 7 142 7.08E-05
GO:0003824 Catalytic activity 26 1598 7.46E-05
GO:0031012 Extracellular matrix 4 34 9.47E-05
GO:0005199 Structural constituent of cell wall 3 15 0.000148
GO:0005975 Carbohydrate metabolic process 14 625 0.000162
GO:0016706 Oxidoreductase activity, acting on paired donors 4 42 0.000219
GO:0005506 Iron ion binding 7 175 0.000259
GO:0016832 Aldehyde-lyase activity 3 19 0.000308
GO:0016614 Oxidoreductase activity, acting on CH-OH group of donors 3 22 0.000483
GO:0016765 Transferase activity, transferring alkyl or aryl (other than methyl) groups 2 6 0.000728
GO:0006979 Response to oxidative stress 11 504 0.000992
GO:0009753 Response to jasmonic acid stimulus 8 295 0.001253
GO:0009821 Alkaloid biosynthetic process 3 35 0.001917
GO:0016844 Strictosidine synthase activity 3 38 0.002433
GO:0016491 Oxidoreductase activity 12 663 0.002847
  1. Note: There are 290 significant genes in the 41,162 downregulated genes