Table 1 Summary of the transcriptome data in sweet potato roots
sample | Raw reads | Clean reads | Clean bases | Total map | Unique map | Multi map | Splice map |
|---|---|---|---|---|---|---|---|
F_1 | 26,124,764 | 25,442,025 | 7.63G | 69.24% | 65.01% | 4.23% | 23.53% |
F_2 | 25,889,827 | 25,359,234 | 7.61G | 69.93% | 65.74% | 4.19% | 23.83% |
F_3 | 25,876,842 | 25,016,010 | 7.5G | 71.83% | 67.42% | 4.41% | 24.55% |
D1_1 | 22,551,090 | 21,935,933 | 6.58G | 75.58% | 71.04% | 4.54% | 24.38% |
D1_2 | 28,567,062 | 28,008,903 | 8.4G | 75.0% | 70.35% | 4.65% | 26.3% |
D1_3 | 26,290,672 | 25,685,971 | 7.71G | 74.25% | 70.05% | 4.2% | 23.12% |
D3_1 | 24,556,185 | 23,919,071 | 7.18G | 75.33% | 70.85% | 4.49% | 26.12% |
D3_2 | 25,349,499 | 24,676,501 | 7.4G | 77.25% | 72.28% | 4.97% | 25.97% |
D3_3 | 25,184,630 | 24,501,723 | 7.35G | 75.68% | 70.92% | 4.77% | 25.59% |
D5_1 | 28,616,823 | 27,935,363 | 8.38G | 75.74% | 71.38% | 4.35% | 25.03% |
D5_2 | 26,397,886 | 25,447,938 | 7.63G | 77.42% | 72.16% | 5.26% | 23.36% |
D5_3 | 23,103,960 | 22,311,013 | 6.69G | 77.14% | 71.65% | 5.49% | 21.79% |
D10_1 | 25,648,113 | 25,081,452 | 7.52G | 76.69% | 72.1% | 4.59% | 26.4% |
D10_2 | 27,226,706 | 26,638,262 | 7.99G | 76.58% | 71.78% | 4.8% | 24.14% |
D10_3 | 25,359,719 | 24,689,508 | 7.41G | 75.29% | 70.95% | 4.34% | 23.74% |