BAC clone/genome | Genea | Functional domains (InterPro) | InterPro ID | Match position (aa) |
---|---|---|---|---|
SD-178_L15 | A5 | NPa | ||
A6 | RX-CC_like | CD14798 | 10..98 | |
Leucine-rich repeat domain superfamily | IPR32675 | 106..563 | ||
F-box-like domain superfamily | IPR001810 | 641..691 | ||
A7 | NP | |||
A8 | RX-CC_like | CD14798 | 33..136 | |
P-loop containing nucleoside triphosphate hydrolase | IPR027417 | 160..425 | ||
NB-ARC | IPR002182 | 173..451 | ||
Winged helix-turn-helix DNA-binding domain superfamily | IPR011991 | 405..487 | ||
Leucine-rich repeat domain superfamily | IPR32675 | 487..1393 | ||
A9 | Gag-polypeptide of LTR copia-type | IPR029472 | 16..59 | |
A10 | RIN4, pathogenic type III effector avirulence factor Avr cleavage site | IPR008700 | 12..47 | |
SD-241_O01 | a1 | Gag-polypeptide of LTR copia-type | IPR029472 | 30..70 |
a2 | RX-CC_like | CD14798 | 33..136 | |
P-loop containing nucleoside triphosphate hydrolase | IPR027417 | 161..425 | ||
NB-ARC | IPR002182 | 173..451 | ||
Winged helix-turn-helix DNA-binding domain superfamily | IPR011991 | 405..490 | ||
Leucine-rich repeat domain superfamily | IPR032675 | 487..1393 | ||
a3 | Gag-polypeptide of LTR copia-type | IPR029472 | 16..59 | |
a4 | RIN4, pathogenic type III effector avirulence factor Avr cleavage site | IPR008700 | 12..47 | |
GDDH13 | G4 | RX-CC_like | CD14798 | 123..249 |
P-loop containing nucleoside triphosphate hydrolase | IPR027417 | 275..544 | ||
NB-ARC | IPR002182 | 304..570 | ||
Winged helix-turn-helix DNA-binding domain superfamily | IPR011991 | 524..608 | ||
Leucine-rich repeat domain superfamily | IPR032675 | 985..1428 | ||
Receptor L-domain superfamily | IPR036941 | 1310..1427 | ||
RIN4, pathogenic type III effector avirulence factor Avr cleavage site | IPR008700 | 1439..1474 | ||
F-box-like domain superfamily | IPR036047 | 1532..1586 | ||
F-box domain | IPR001810 | 1530..1570 | ||
G5 | Endonuclease/exonuclease/phosphatase superfamily | IPR036691 | 110..358 | |
SWR1-complex protein 5/craniofacial development protein | IPR027124 | 112..406 | ||
Reverse transcriptase domain | IPR000477 | 621..867 | ||
G6 | NP | |||
G7 | NP | |||
G8 | NP | |||
G9 | NP | |||
G10 | NP | |||
G11 | NP | |||
G12 | Endonuclease/exonuclease/phosphatase superfamily | IPR036691 | 94..300 | |
SWR1-complex protein 5/craniofacial development protein | IPR027124 | 57..78 | ||
SWR1-complex protein 5/craniofacial development protein | IPR027124 | 97..298 | ||
G13 | Gag-polypeptide of LTR copia-type | IPR029472 | 30..70 | |
GAG-pre-integrase domain | IPR025724 | 268..328 | ||
G14 | RX-CC_like | CD14798 | 33..136 | |
P-loop containing nucleoside triphosphate hydrolase | IPR027417 | 161..425 | ||
NB-ARC | IPR002182 | 173..451 | ||
Winged helix-turn-helix DNA-binding domain superfamily | IPR011991 | 405..487 | ||
Leucine-rich repeat domain superfamily | IPR032675 | 487..1393 | ||
G15 | Gag-polypeptide of LTR copia-type | IPR029472 | 16..59 | |
G16 | RIN4, pathogenic type III effector avirulence factor Avr cleavage site | IPR008700 | 12..47 |