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Table 2 Selected genes for transcript profiling based on biological function and expression profiles of corresponding proteins

From: Comparative proteomics and gene expression analyses revealed responsive proteins and mechanisms for salt tolerance in chickpea genotypes

Gene

Biological function

Spot no. /cluster

Primer sequence (5′ – 3′)

PCR product size (bp)

GeneBank accession no.

Actin

Reference gene

–

F:TGTTCCCCGGAATTGCTGATAGAATGAGC

R:TTGGAAAGTGCTGAGAGATGCCAAAATGGAG

146

AJ012685

Carbonic anhydrase

Photosynthesis

45 / 4

F: TTGAAGTGAAGGAAACC

R: AGAAGAAATGGGAAAGG

195

LOC101498889

Glycerate dehydrogenase

Amino acid & nitrogen metabolism

39 / 3

F: GAAAGACTCGCCAAGA

R: GGGCTCATCCTCAAAC

141

LOC101496862

Heat shock 70 kDa protein

Stress responsive

4 / 3

F: CTTGATGTAACGCCACTT

R: GTCCACCAGATGACCTAATA

346

LOC101502051

L-ascorbate peroxidase

Stress responsive

55 / 5

F: AAATCTTACCCAACCGTCA

R: CAACAACACCACCCAACT

304

LOC101497640

ATP-dependent zinc metalloprotease FTSH2

Protein synthesis and degradation

2 / 4

F: AAAGAACAACCGTGAAGCAA

R: CGGCGACTGGTAATGGA

152

LOC101512859

6-phosphogluconate dehydrogenase

Other metabolisms: PP

15 / 4

F: TGACAGCAAGGCAAACAACTC

R: CAGGCATACGACAGAAACCC

112

LOC101509898