Sample name | B3 | B4 | B5 | B6 | BM | Y3 | Y4 | Y5 | Y6 | YM |
---|---|---|---|---|---|---|---|---|---|---|
Raw reads | 47,536,866 | 42,753,820 | 44,341,556 | 51,507,518 | 51,272,946 | 48,704,282 | 45,694,038 | 44,797,562 | 45,996,584 | 52,804,244 |
Clean reads | 45,555,018 | 41,801,216 | 40,620,518 | 43,833,034 | 48,665,348 | 46,813,976 | 43,798,322 | 42,843,336 | 43,736,106 | 50,268,482 |
Total mapped | 36,499,205 (80.12%) | 34,214,293 (81.85%) | 32,844,328 (80.86%) | 35,032,820 (79.92%) | 39,325,179 (80.81%) | 38,116,991 (81.42%) | 35,893,586 (81.95%) | 35,376,347 (82.57%) | 36,029,106 (82.38%) | 40,839,634 (81.24%) |
Multiple mapped | 2,175,877 (4.78%) | 2,332,136 (5.58%) | 2,561,972 (6.31%) | 3,271,514 (7.46%) | 3,151,365 (6.48%) | 2,327,452 (4.97%) | 2,287,911 (5.22%) | 2,274,889 (5.31%) | 2,451,932 (5.61%) | 3,198,280 (6.36%) |
Uniquely mapped | 34,323,328 (75.34%) | 31,882,157 (76.27%) | 30,282,356 (74.55%) | 31,761,306 (72.46%) | 36,173,814 (74.33%) | 35,789,539 (76.45%) | 33,605,675 (76.73%) | 33,101,458 (77.26%) | 33,577,174 (76.77%) | 37,641,354 (74.88%) |
Reads map to ‘+’ | 17,137,064 (37.62%) | 15,873,247 (37.97%) | 15,138,033 (37.27%) | 15,900,632 (36.28%) | 18,123,297 (37.24%) | 17,872,927 (38.18%) | 16,769,787 (38.29%) | 16,508,902 (38.53%) | 16,764,771 (38.33%) | 18,866,098 (37.53%) |
Reads map to ‘-’ | 17,186,264 (37.73%) | 16,008,910 (38.3%) | 15,144,323 (37.28%) | 15,860,674 (36.18%) | 18,050,517 (37.09%) | 17,916,612 (38.27%) | 16,835,888 (38.44%) | 16,592,556 (38.73%) | 16,812,403 (38.44%) | 18,775,256 (37.35%) |
Non-splice reads | 21,266,684 (46.68%) | 21,368,313 (51.12%) | 21,381,177 (52.64%) | 22,323,651 (50.93%) | 24,534,251 (50.41%) | 22,491,873 (48.05%) | 22,291,894 (50.9%) | 24,114,006 (56.28%) | 24,559,779 (56.15%) | 26,061,989 (51.85%) |
Splice reads | 13,056,644 (28.66%) | 10,513,844 (25.15%) | 8,901,179 (21.91%) | 9,437,655 (21.53%) | 11,639,563 (23.92%) | 13,297,666 (28.41%) | 11,313,781 (25.83%) | 8,987,452 (20.98%) | 9,017,395 (20.62%) | 11,579,365 (23.04%) |