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Fig. 4 | BMC Plant Biology

Fig. 4

From: Genome-wide identification of cyclophilin genes in Gossypium hirsutum and functional characterization of a CYP with antifungal activity against Verticillium dahliae

Fig. 4

Expression profiles of CYPs from upland cotton inoculated with V. dahliae. Differential expression analysis was performed using the DESeq R package (1.10.1). The fold change (FC) is the ratio of treatment FPKM to control FPKM. Expression data are shown as log2(FC). The resulting P-values were adjusted using the Benjamini and Hochberg’s approach for controlling the false discovery rate. Genes with an adjusted P < 0.05 according to DESeq were assigned as differentially expressed and marked with a red arrow (up-regulated) or green arrow (down-regulated). hpi, hours post inoculation

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BMC Plant Biology

ISSN: 1471-2229

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