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Table 3 Distribution of genes and Intergenic regions for 22 species in Lythraceae

From: Comparative analyses of chloroplast genomes from 22 Lythraceae species: inferences for phylogenetic relationships and genome evolution within Myrtales

 

L.excelsa

L.limii

L.villosa

L.siamica

L.tomentosa

L.venusta

L.calyculata

L.fauriei

L.floribunda

L.guilinensis

Accession number

MK881635

MK881627

MK881633

MK881628

MK881632

MK881630

MK881636

NC_029808

NC_031825

NC_029885

Family

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Protein Coding Genes

 Length (bp)

79,046

79,080

79,648

79,056

79,062

79,059

79,062

79,062

78,852

79,068

 GC(%)

37.86

37.84

37.77

37.8

37.87

37.8

37.86

37.84

37.92

37.86

 length(%)

52

52

50

52

52

52

52

52

52

52

rRNA

 Length (bp)

9038

9038

9035

9040

9038

9040

9038

9068

9044

9044

 GC(%)

55.72

55.72

55.43

55.62

55.68

55.64

55.68

55.67

55.57

55.71

 length(%)

6

6

6

6

6

6

6

6

6

6

tRNA

 Length (bp)

2913

2819

2814

2808

2813

2814

2813

2809

2745

2741

 GC(%)

52.8

53.35

53.2

53.45

53.47

53.45

53.47

53.15

53.55

53.37

 length(%)

2

2

2

2

2

2

2

2

2

2

Intergenic Regions

 Length (bp)

45,482

46,156

51,367

45,619

45,941

45,486

46,033

44,138

45,266

44,031

 GC(%)

32.55

32.43

31.3

32.52

32.49

32.54

32.84

32.37

32.54

32.37

 length(%)

30

30

32

30

30

30

30

29

30

29

Intron

 Length (bp)

15,334

15,419

18,099

15,607

15,590

15,606

14,786

15,834

15,877

15,596

 GC(%)

38.2

38.19

37.82

38.19

38.32

38.18

37.64

38.42

38.7

38.33

 length(%)

10

10

11

10

10

10

10

10

10

10

L. indica

L.speciosa

L.subcostata

L.intermedia

D.grandiflora

T.natans

L.salicaria

L.intermis

P.granatum

W.fruticosa

R.rotundifolia

H.myrtifolia

NC_030484

NC_031414

NC_034952

NC_034662

MK881638

MK881634

MK881629

MK881631

NC_035240

MK881637

MK881626

MG921615

Lythraceae

Lythraceae

Lythraceae

Lythraceae

Sonneratiaceae

Trapaceae

Lythraceae

Lythraceae

Punicaceae

Lythraceae

Lythraceae

Lythraceae

Protein Coding Genes

 73,401

79,044

77,139

79,035

78,993

78,848

78,849

79,006

79,029

78,978

79,000

81,047

 38.45

37.79

37.76

37.81

37.88

37.27

37.62

37.54

37.63

37.53

37.54

37.00

 48

52

51

52

51

51

50

50

50

50

50

51

rRNA

 9050

9046

9042

9046

9040

9022

9038

9038

9038

9038

9038

9050

 55.69

55.56

55.68

55.58

55.55

55.51

55.17

55.28

55.26

55.28

55.28

55.00

 6

6

6

6

6

6

6

6

6

6

6

6

tRNA

 2817

2742

2828

2807

2903

2812

2813

2812

2817

2819

2812

2817

 53.25

53.61

53.39

53.44

52.77

53.24

53.36

53.31

53.28

53.42

53.31

53.00

 2

2

2

2

2

2

2

2

2

2

2

2

Intergenic Regions

 44,535

44,313

44,184

45,346

45,923

48,755

50,851

49,417

51,357

50,989

49,441

50,172

 32.35

32.45

32.61

32.58

32.36

30.46

31.32

31.38

31.55

30.99

31.62

32.00

 29

29

29

30

29

31

32

31

32

32

31

32

Intron

 16,226

15,861

16,201

16,375

15,879

15,564

15,943

15,915

15,928

15,973

15,915

16,133

 37.91

38.33

37.87

37.89

38.27

37.14

37.78

37.79

37.9

37.7

37.79

38.00

 11

10

11

11

10

10

10

10

10

10

10

10

  1. GC guanine-cytosine, LSC large single-copy region, SSC short single-copy region, IRs inverted repeats