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Table 1 OLE genes in B. napus genome and their sequence characteristics and physicochemical parameters prediction

From: Genome-wide identification and functional analysis of oleosin genes in Brassica napus L.

Gene ID

Name

family

chr.

gene position

gene length

exon

intron

Number of aa

Mol.Wt.

Theoretical pI

Aliphatic index

GRAVY

start

end

BnaA01g14480D

BnaOLE1A01

SH

A01

7,305,082

7,306,307

1226

3

2

170

18,556.14

9.52

86.65

−0.194

BnaA01g26680D

BnaOLE8A01

U

A01

18,669,237

18,669,731

495

1

0

164

18,141.98

9.39

96.4

0.232

BnaA02g29000D

BnaOLE3

SL

A02

21,253,735

21,254,824

1090

2

1

188

20,001.84

9.15

97.02

−0.005

BnaA02g35480D

BnaOLE18

U

A02_R

273,275

273,804

530

1

0

131

13,569.19

8.8

121.15

0.926

BnaA03g02100D

BnaOLE19

T

A03

962,155

963,313

1159

2

1

272

27,116.61

10.21

77.43

0.057

BnaA03g02110D

BnaOLE20

T

A03

964,861

966,041

1181

2

1

207

21,751.38

10

82.46

−0.189

BnaA03g02120D

BnaOLE13A03

T

A03

967,459

968,374

916

1

0

79

7931.6

5.75

136.08

1.597

BnaA03g02140D

BnaOLE21

T

A03

975,911

977,658

1748

3

2

119

12,160.68

10.3

115.63

0.759

BnaA03g27410D

BnaOLE22

SL

A03

13,512,809

13,516,176

3368

5

4

778

86,260.73

7.3

93.07

−0.03

BnaA03g34830D

BnaOLE8A03

U

A03

17,011,078

17,011,575

498

1

0

165

17,821.37

6.38

95.76

0.421

BnaA03g40390D

BnaOLE17A03

T

A03

20,190,729

20,192,198

1470

3

2

251

27,929.33

9.08

92.11

−0.162

BnaA03g47170D

BnaOLE1A03

SH

A03

24,188,857

24,190,194

1338

2

1

183

20,001.69

9.3

84.81

−0.234

BnaA04g15210D

BnaOLE6A04

SH

A04

12,660,472

12,660,912

441

1

0

146

15,657.25

8.66

92.88

0.277

BnaOLE2

BnaOLE2

U

A04

9,050,747

9,051,738

992

1

0

220

23,048.11

9.1

77.59

−0.083

BnaA05g21590D

BnaOLE8A05

U

A05

16,610,133

16,610,630

498

1

0

165

17,932.6

9.52

97.52

0.339

BnaA06g03370D

BnaOLE23

SL

A06

2,059,111

2,061,705

2595

7

6

517

57,648.71

8.59

92.75

−0.032

BnaA07g14960D

BnaOLE2A07

SH

A07

13,061,213

13,062,594

1382

3

2

200

21,284.38

9.3

88.3

−0.046

BnaA08g14540D

BnaOLE1

T

A08

12,282,608

12,283,829

1222

2

1

180

19,514.98

9.15

84.61

−0.248

BnaA08g22860D

BnaOLE24

SL

A08

16,473,505

16,474,574

1070

2

1

209

20,340.83

9.7

99.43

0.75

BnaA09g02110D

BnaOLE4A09

U

A09

1,040,084

1,041,270

1187

2

1

188

19,879.71

6.91

96.97

0.045

BnaA10g05240D

BnaOLE25

SH

A10

2,963,139

2,963,633

495

1

0

164

17,864.6

9.1

98.17

0.347

BnaA10g05760D

BnaOLE3A10

T

A10

3,966,784

3,967,565

782

2

1

149

15,574.98

10.1

104.09

0.286

BnaA10g23950D

BnaOLE26

T

A10

15,705,746

15,706,808

1063

2

1

175

17,006.96

10.12

110.51

0.852

BnaA10g23960D

BnaOLE27

T

A10

15,711,917

15,713,045

1129

2

1

195

19,523.32

10.91

119.33

0.841

BnaA10g30180D

BnaOLE28

T

A10_R

2,101,896

2,103,711

1816

2

1

204

20,585.57

9.4

78.04

−0.185

BnaA10g30190D

BnaOLE29

SH

A10_R

2,105,832

2,106,825

994

2

1

108

11,032.19

11.17

116.57

0.807

BnaC01g17050D

BnaOLE1C01

U

C01

11,676,131

11,677,343

1213

3

2

170

18,571.08

9.39

82.65

−0.224

BnaC01g34070D

BnaOLE8C01

T

C01

33,257,398

33,257,892

495

1

0

164

17,864.6

9.1

98.17

0.347

BnaC02g01550D

BnaOLE30

T

C02

627,160

628,665

1506

2

1

149

14,826.83

11.28

107.65

0.682

BnaC02g01560D

BnaOLE31

T

C02

629,668

630,975

1308

2

1

157

15,236.32

10.72

109.87

0.73

BnaC02g01570D

BnaOLE32

SL

C02

633,723

637,275

3553

3

2

870

88,165.02

10.4

51.98

−0.891

BnaC02g37030D

BnaOLE4C02

T

C02

40,002,669

40,003,899

1231

2

1

191

20,248.17

7.89

101.1

0.058

BnaC03g03140D

BnaOLE33

T

C03

1,516,588

1,518,583

1996

3

2

214

22,584.38

10.17

81.59

−0.196

BnaC03g03150D

BnaOLE13C03

T

C03

1,519,876

1,520,984

1109

2

1

116

12,072.39

9.3

106.98

0.456

BnaC03g03170D

BnaOLE34

SL

C03

1,525,165

1,526,940

1776

2

1

120

12,506.14

9.9

133.42

1.066

BnaC03g32430D

BnOLE37

U

C03

19,921,970

19,925,218

3249

4

3

777

86,175.33

6.29

93.56

−0.004

BnaC03g40520D

BnaOLE8C03

SL

C03

25,478,827

25,479,324

498

1

0

165

17,778.43

6.9

101.7

0.474

BnaC04g32530D

BnaOLE2C04

SH

C04

34,250,286

34,251,730

1445

2

1

229

24,575.09

9.34

75.02

−0.111

BnaC04g38160D

BnaOLE6C04

U

C04

39,433,420

39,433,857

438

1

0

145

15,567.15

7.85

98.21

0.334

BnaC05g34600D

BnaOLE8C05

U

C05

33,883,325

33,883,822

498

1

0

165

17,994.67

9.52

96.3

0.352

BnaC06g02430D

BnaOLE35

SL

C06

3,184,669

3,187,278

2610

7

6

517

57,886.95

8.78

92.17

−0.05

BnaC06g12930D

BnaOLE2C06

T

C06

15,634,774

15,636,282

1509

3

2

200

21,275.37

9.3

88.3

−0.048

BnaC07g31360D

BnaOLE17C07

SH

C07

35,479,311

35,480,772

1462

3

2

251

27,859.39

9.22

94.82

−0.139

BnaC07g39370D

BnaOLE1C07

U

C07

40,278,874

40,279,959

1086

2

1

186

20,565.22

9.15

82.9

−0.354

BnaC08g03140D

BnaOLE5

SH

C08

2,826,379

2,826,801

423

1

0

140

15,613.35

10.16

108.71

0.513

BnaC08g11970D

BnaOLE1C08

SH

C08

17,257,794

17,259,450

1657

3

2

179

19,424.86

9.15

85.08

−0.288

BnaC09g27370D

BnaOLE3C09

T

C09

29,151,518

29,153,074

1557

2

1

149

15,711.18

9.99

104.09

0.311

BnaC09g47930D

BnaOLE36

SL

C09

47,002,663

47,003,720

1058

2

1

171

16,666.58

10.39

107.37

0.839

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BMC Plant Biology

ISSN: 1471-2229

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