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Fig. 3 | BMC Plant Biology

Fig. 3

From: Genetic diversity, linkage disequilibrium, and population structure analysis of the tea plant (Camellia sinensis) from an origin center, Guizhou plateau, using genome-wide SNPs developed by genotyping-by-sequencing

Fig. 3

Cluster analysis based on genetic distance using an UPGMA tree. a UPGMA cluster tree compared with both growth habits, wild type (red) and cultivation type (green). b UPGMA cluster tree compared with STRUCTUER results (k = 2), Pure Wild Type (red), Pure Cultivation Type (green) and Admixed Wild Type (yellow). c UPGMA cluster tree compared with growthway, modern cultivation (red), ancient cultivation (green) and wild (yellow). d UPGMA cluster tree compared with classification results, C.tachangensis (red), C.sinensis (green), C.remotiserrata (yellow) and uncertain species (blue). e UPGMA cluster tree include 4 inferred groups, GP01 (red), GP02 (yellow), GP03–1 (green) and GP03–2 (purple)

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