Table 1 Details of the sequencing results for each library
Sample | Raw reads | Clean reads | Q20 | Q30 | GC content | Total mapped |
|---|---|---|---|---|---|---|
G1 | 92829726 | 89704724 | 97.52% | 93.45% | 45.73% | 59932101 (69.47%) |
G2 | 97076562 | 93532184 | 97.57% | 93.58% | 45.18% | 64011228 (70.75%) |
G3 | 112196528 | 108293974 | 97.44% | 93.26% | 45.31% | 63965242 (68.38%) |
R1 | 97152808 | 94112790 | 97.58% | 93.59% | 45.51% | 69820488 (77.83%) |
R2 | 104256414 | 100288582 | 97.93% | 94.46% | 43.97% | 72182983 (77.17%) |
R3 | 95928048 | 93646824 | 97.58% | 93.63% | 45.52% | 84334768 (77.88%) |
C1 | 93075210 | 86272576 | 97.4% | 93.11% | 44.63% | 67078059 (72.36%) |
C2 | 93444728 | 90470954 | 96.79% | 91.79% | 44.31% | 63906134 (73.3%) |
C3 | 96753370 | 93541480 | 97.03% | 92.3% | 44.35% | 62446273 (72.83%) |
P1 | 96824816 | 92698452 | 97.4% | 93.09% | 43.84% | 62482447 (66.39%) |
P2 | 92759570 | 87179606 | 97.35% | 93.01% | 44.03% | 71196448 (70.99%) |
P3 | 89552648 | 85744822 | 97.46% | 93.19% | 44.32% | 65594886 (70.04%) |
Reads Average | 96820869 | 92957247.3 | Â | Â | Â | Â |