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Table 1 DEGs involved in plant hormone signal transduction pathway

From: Integrative omics analysis on phytohormones involved in oil palm seed germination

Components 0d-Vs-70d 0d-Vs-75d
DEGs ↑regulated ↓regulated DEGs ↑regulated ↓regulated
Auxin 45 36 9 41 32 9
AUX1 5 5 0 4 4 0
TIR1 5 3 2 3 2 1
AUX/IAA 14 12 2 14 11 3
ARF 9 6 3 9 6 3
GH3 3 3 0 3 3 0
SAUR 9 7 2 8 6 2
Cytokinin 40 30 10 41 30 11
CRE1 19 12 7 18 11 7
B-ARR 18 15 3 20 17 3
A-ARR 3 3 0 3 2 1
Gibberellin 27 23 4 27 23 4
GID1 11 10 1 12 11 1
GID2 2 2 0 2 2 0
DELLA 14 11 3 13 10 3
Abscisic acid 43 31 12 45 33 12
PYR/PYL 8 8 0 8 8 0
PP2C 30 21 9 31 22 9
SnRK2 1 0 1 2 1 1
ABF 4 2 2 4 2 2
Ethylene 28 15 13 30 15 15
ETR 2 0 2 2 0 2
CTR1 13 7 6 12 5 7
MPK6 3 3 0 3 3 0
EIN2 4 0 4 4 0 4
EBF 1/2 0 0 0 1 0 1
ERF 1/2 6 5 1 8 7 1
Brassinosteroid 42 33 9 37 30 7
BAK1 13 10 3 10 7 3
BRI1 9 7 2 8 7 1
BSK 1 1 0 1 1 0
BSU1 1 0 1 0 0 0
BZR1/2 6 4 2 6 4 2
TCH4 7 6 1 8 7 1
CYCD3 5 5 0 4 4 0
Jasmonic acid 30 26 4 32 29 3
JAR1 2 2 0 2 2 0
COI1 1 0 1 1 0 1
JAZ 11 11 0 11 11 0
MYC2 16 13 3 18 16 2
Salicylic acid 13 9 4 13 10 3
NPR1 2 2 0 1 1 0
TGA 10 6 4 11 8 3
PR1 1 1 0 1 1 0
Total 268 203 65 266 202 64