Table 1 NUPT sequences in the nuclear genome of A. officinalis
Chromosome | No. of NUPTs | Proportion of No. of NUPTs (%) | Density (No./100 Mb) | Total length of NUPTs (bp) | Standard length of NUPTs (bp/100 Mb) |
|---|---|---|---|---|---|
1(Y) | 440 | 13.95 | 332 | 114,469 | 86,463 |
2 | 234 | 7.42 | 276 | 42,048 | 49,626 |
3 | 314 | 9.95 | 277 | 71,867 | 63,453 |
4 | 344 | 10.90 | 235 | 69,160 | 47,189 |
5 | 382 | 12.11 | 291 | 82,497 | 62,750 |
6 | 187 | 5.93 | 237 | 50,734 | 64,400 |
7 | 377 | 11.95 | 249 | 80,276 | 53,036 |
8 | 379 | 12.01 | 289 | 70,305 | 53,529 |
9 | 190 | 6.02 | 277 | 46,566 | 67,940 |
10 | 169 | 5.36 | 230 | 35,123 | 47,819 |
Unplaced scaffolds | 139 | 4.41 | 184 | 40,013 | 52,892 |
Total/average | 3155 | 100 | 266 | 703,058 | 59,203 |