From: Roles of the SPL gene family and miR156 in the salt stress responses of tamarisk (Tamarix chinensis)
Gene | RNA-seq ID | Source | CDS (bp) | SBP-box | MRE type | MRE location |
---|---|---|---|---|---|---|
TcSPL1 | comp24748 | RACE | 1449 | conserved | cleavage | CDS |
TcSPL2 | comp17803 | RACE | 624 | conserved | cleavage | 3’UTR |
TcSPL3 | comp19945 | RACE | 1359 | conserved | cleavage | CDS |
TcSPL4 | comp14758 | RACE | 576 | conserved | cleavage | 3’UTR |
TcSPL5 | comp16909 | RACE | 1338 | conserved | inhibition; cleavage | CDS |
TcSPL6 | comp8034 | PCR | 3024 | conserved | \ | \ |
TcSPL7 | comp25771 | PCR | 2502 | conserved | \ | \ |
TcSPL8 | comp16485 | PCR | 1203 | conserved | cleavage | CDS |
TcSPL9 | comp19275 | PCR | 2043 | conserved | \ | \ |
TcSPL10 | comp20377 | PCR | 1743 | conserved | \ | \ |
TcSPL11 | comp87279 | Predicted | 666a | conserved | \ | \ |
TcSPL12 | comp9552 | Predicted | 492a | conserved | \ | \ |
TcSPL13 | comp172543 | Predicted | 309a | Incomplete | \ | \ |
TcSPL14 | comp15035 | Predicted | 312a | Incomplete | \ | \ |