Table 1 Synonymous (Ks) and non-synonymous (Ka) substitution rates are represented for each gene pairs and the estimated time for the tandem and segmental duplication events C2H2-zinc finger genes
Gene 1 | Gene 2 | Ka | Ks | Ka/Ks | Negative selection | Duplicated time (Mya) |
|---|---|---|---|---|---|---|
Gh_A01G1610 | Gh_D01G1850 | 0.0147 | 0.0446 | 0.329596 | Yes | 1.486667 |
Gh_A04G0724 | Gh_D04G1191 | 0.0164 | 0.0404 | 0.405941 | Yes | 1.346667 |
Gh_A05G0618 | Gh_D05G0749 | 0.0324 | 0.0331 | 0.978852 | Yes | 1.103333 |
Gh_A05G2644 | Gh_D05G2946 | 0 | 0 | 0 | Yes | 0 |
Gh_A05G2922 | Gh_A05G2923 | 0 | 0 | 0 | Yes | 0 |
Gh_A05G3205 | Gh_D04G0401 | 0.0161 | 0.0546 | 0.294872 | Yes | 1.82 |
Gh_A06G0175 | Gh_D06G0169 | 0.0042 | 0.0076 | 0.552632 | Yes | 0.253333 |
Gh_A06G1535 | Gh_D06G1905 | 0.0374 | 0.0634 | 0.589905 | Yes | 2.113333 |
Gh_A09G0835 | Gh_D09G0856 | 0.0127 | 0.031 | 0.409677 | Yes | 1.033333 |
Gh_A10G1009 | Gh_D10G1529 | 0.0286 | 0.069 | 0.414493 | Yes | 2.3 |
Gh_A10G1921 | Gh_D10G2215 | 0.0247 | 0 | 0 | Yes | 0 |
Gh_A13G0183 | Gh_D13G0198 | 0.0192 | 0.0199 | 0.964824 | Yes | 0.663333 |
Gh_A13G2132 | Gh_D13G0718 | 0.0028 | 0 | 0 | Yes | 0 |
Gh_D02G1695 | Gh_A03G1255 | 0.0167 | 0.0102 | 1.637255 | No | 0.34 |
Gh_D02G2295 | Gh_A03G1856 | 0.0204 | 0.028 | 0.728571 | Yes | 0.933333 |
Gh_D05G0854 | Gh_A05G0718 | 0.0148 | 0.0154 | 0.961039 | Yes | 0.513333 |
Gh_D05G0878 | Gh_A05G0747 | 0.0028 | 0 | 0 | Yes | 0 |
Gh_D05G1143 | Gh_A05G1026 | 0.018 | 0 | 0 | Yes | 0 |
Gh_D05G1990 | Gh_A05G1795 | 0.0379 | 0 | 0 | Yes | 0 |
Gh_D05G2011 | Gh_A05G1815 | 0.0339 | 0.0126 | 2.690476 | No | 0.42 |
Gh_D06G0302 | Gh_A06G0282 | 0.0104 | 0 | 0 | Yes | 0 |
Gh_D06G0903 | Gh_A06G0780 | 0.0064 | 0.0443 | 0.14447 | Yes | 1.476667 |
Gh_D07G2141 | Gh_A07G1918 | 0 | 0.0309 | 0 | Yes | 1.03 |
Gh_D09G1495 | Gh_A09G1485 | 0.0166 | 0.0131 | 1.267176 | No | 0.436667 |
Gh_D09G1496 | Gh_A09G1486 | 0.0167 | 0.0258 | 0.647287 | Yes | 0.86 |
Gh_D10G1973 | Gh_A10G1704 | 0.0412 | 0.1067 | 0.386129 | Yes | 3.556667 |
Gh_D10G2214 | Gh_A10G2356 | 0.0374 | 0 | 0 | Yes | 0 |
Gh_D10G2304 | Gh_A10G1997 | 0.0275 | 0.01 | 2.75 | No | 0.333333 |
Gh_D11G0560 | Gh_A11G0482 | 0.0217 | 0.0436 | 0.497706 | Yes | 1.453333 |
Gh_D11G2018 | Gh_A11G1957 | 0.0455 | 0.0141 | 3.22695 | No | 0.47 |
Gh_D11G2046 | Gh_A11G1928 | 0.0106 | 0.0149 | 0.711409 | Yes | 0.496667 |
Gh_D12G2156 | Gh_A12G1978 | 0.0111 | 0.0092 | 1.206522 | No | 0.306667 |
Gh_D13G0287 | Gh_A13G0268 | 0.023 | 0.032 | 0.71875 | Yes | 1.066667 |
Gh_D13G0838 | Gh_A13G0716 | 0.0241 | 0.0149 | 1.61745 | No | 0.496667 |
Gh_D13G1149 | Gh_A13G0909 | 0.0419 | 0.0318 | 1.31761 | No | 1.06 |
Gh_D13G1953 | Gh_A13G1592 | 0 | 0 | 0 | Yes | 0 |
Gh_D13G2392 | Gh_A13G1993 | 0 | 0.0277 | 0 | Yes | 0.923333 |