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Table 5 Location, significance and confidence interval of QTL identified by MQM in ‘Tanabe 54’ x ‘Tosashimizu 63’ F1 population for PWD resistance

From: Construction of genetic linkage map and identification of a novel major locus for resistance to pine wood nematode in Japanese black pine (Pinus thunbergii)

Tanabe 54′ linkage map

Integrated map

LGa

LOD threshold-GWb

LOD threshold-LG specific

Max LOD

% Varc

Nearest marker

QTL confidence interval (cM)

LOD threshold-GWb

LOD threshold-LG specific

Max LOD

% Varc

Nearest marker

QTL confidence interval (cM)

03

2.6

1.6

4.27

9.9

GG_BPCS14F07_283

38.7–45.8

4.3

2.9

5.51

12.6

GG_BPCS14F07_283

41.8–50.8

  1. a Linkage group
  2. b Genome-wide
  3. c Percentage phenotypic variance explained