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Fig. 1 | BMC Plant Biology

Fig. 1

From: Colonisation of Oncidium orchid roots by the endophyte Piriformospora indica restricts Erwinia chrysanthemi infection, stimulates accumulation of NBS-LRR resistance gene transcripts and represses their targeting micro-RNAs in leaves

Fig. 1

Phylogenetic analysis of R proteins of Oncidium, Phalaenopsis equestris and Dendrobium officinale orchids. Bootstrap Neighbor-Joint tree was constructed for the R proteins from Oncidium (ONC, green), Phalaenopsis equestris (PEQU, red) and Dendrobium officinale (DEND, blue) using MEGA6.01 and the respective NBARC domains (from P-loop to MHD-like domain) (Fig. 2). The sequences were compared to 15 known R protein sequences: TNL: RPP-1 (AAC72977), RPS4 (BAB11393); NL: Pi9 (ABB88855), Pi2 (ABC94599), Pib (BAA76281); XNL: Prf (U65391); CNL: Rp1 (AAP81262), RXO1 (AY935244), Xa1 (BAA25068), Pita (AAK00132), Cre3 (AAC05834), Lr10 (aaq01784), RPM1 (NP187360), RPP13 (AF209732) and HERO (CAD29728)

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