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Table 3 Genes annotated for developmental processes, reproduction and/or embryo development between normal and teratological male

From: Differential gene expression among three sex types reveals a MALE STERILITY 1 (CpMS1) for sex differentiation in papaya

Gene ID

Description

LogCPM

Normal male vs. Teratological male

FC*

FDR*

evm.model.supercontig_6.104

Steroid 22-alpha-hydroxylase /cytochrome P450 90B1-like

3.97

5.91

8.19E-03

evm.model.supercontig_1525.1

Abscisic acid 8-hydroxylase 1

5.22

4.89

1.30E-02

evm.model.supercontig_427.3

Protein of unknown function (DUF642)

6.77

4.33

3.66E-04

evm.model.supercontig_26.316

Floral homeotic protein PISTILLATA

6.99

3.62

1.79E-02

evm.model.supercontig_70.45

Potassium transporter 4

7.87

3.45

4.35E-03

evm. TU.contig_30608.1

CRABS CLAW/ HMG-box domain (HMG box 2)

7.20

3.04

8.59E-03

evm.model.supercontig_7.3

Auxin response factor 3

5.25

2.79

6.33E-03

evm.model.supercontig_2.240

DELLA GAIP-B-like

7.10

−2.16

4.21E-02

evm.model.supercontig_55.116

Floral homeotic protein APETALA 2

6.93

−2.41

1.21E-02

evm.model.supercontig_233.1

AP2-like ethylene-responsive transcription factor AIL5

5.82

−2.63

2.89E-03

evm.model.supercontig_157.48

DNA repair protein RAD50

5.43

−2.76

4.12E-02

evm.model.supercontig_81.9

Kinesin family member C1 (KIFC1)

5.45

−2.83

2.85E-02

evm.model.supercontig_200.13

Cyclin-D3–1

4.91

−2.85

4.18E-02

evm.model.supercontig_52.111

VAN3-binding/Auxin canalisation (Auxin canalis)

5.61

−3.44

2.52E-03

evm.model.supercontig_6.188

3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3)

7.20

−3.90

1.30E-03

evm.model.supercontig_3.468

Kinesin-like protein NACK1

4.73

−4.49

6.47E-03

evm.model.supercontig_129.70

AP2-like ethylene-responsive transcription factor ANT

4.92

−4.92

1.97E-02

evm.model.supercontig_127.38

BTB POZ domain-containing NPY1

5.96

−5.36

1.83E-03

evm.model.supercontig_151.45

1,4-beta-D-xylan synthase

5.73

−5.86

2.76E-03

evm.model.supercontig_125.26

DNA topoisomerase 2 (TOP2)

5.65

−6.34

2.24E-03

evm.model.supercontig_84.93

Histone H3

5.65

−6.46

1.93E-03

evm.model.supercontig_160.33

AP2-like ethylene-responsive transcription factor ANT

5.37

−6.91

6.53E-04

evm.model.supercontig_20.162

Expansin-like A2

6.35

−7.60

1.86E-04

evm.model.supercontig_84.92

Histone H3

6.36

−7.73

4.59E-04

evm.model.supercontig_19.182

cytochrome P450 90A1 (CYP90A1, CPD)

6.70

−8.65

3.44E-05

evm.model.supercontig_97.108

COMITIN

4.66

−16.92

7.80E-04

evm.model.supercontig_21.170

WUSCHEL-related homeobox 4

4.45

−21.19

3.80E-03

evm.model.supercontig_49.19

Abscisic acid 8 -hydroxylase 4

3.51

−21.94

5.76E-03

evm.model.supercontig_25.116

AP2-like ethylene-responsive transcription factor AIL1

2.96

−60.27

7.64E-04

  1. aDifferentially expressed genes parameters: Fold-Change (FC) > 2 or < −2 and a False Discovery Rate (FDR) < 0.05